Cupriavidus basilensis: RR42_m0330
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Entry
RR42_m0330 CDS
T03642
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cbw
Cupriavidus basilensis
Pathway
cbw00061
Fatty acid biosynthesis
cbw00071
Fatty acid degradation
cbw01100
Metabolic pathways
cbw01212
Fatty acid metabolism
cbw02024
Quorum sensing
cbw04146
Peroxisome
Module
cbw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RR42_m0330
00071 Fatty acid degradation
RR42_m0330
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RR42_m0330
09145 Cellular community - prokaryotes
02024 Quorum sensing
RR42_m0330
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cbw01004
]
RR42_m0330
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbw04147
]
RR42_m0330
Enzymes [BR:
cbw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RR42_m0330
Lipid biosynthesis proteins [BR:
cbw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RR42_m0330
Exosome [BR:
cbw04147
]
Exosomal proteins
Exosomal proteins of breast milk
RR42_m0330
Exosomal proteins of breast cancer cells
RR42_m0330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AJG17744
UniProt:
A0A0C4Y6K9
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All DBs
Position
main:369975..371945
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AA seq
656 aa
AA seq
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MQEPSATTFPRLLLAHAQQRPESPAYREKDLGIWQTYSWAQTAQEVRALACGLAALGFAR
GMNLAVVGDNRPRLYWAMSAAQAMGGVPVPLYQDAIAGEMIYVLNDAEIDFAIVEDQEQV
DKLLEVEEQLAAQGRKVRHIIYEDPRGLRDYDHPALMSYQRLQEIGREFDRANPGYFDAA
VAAGEPDDTAIILYTSGTTGKPKGVCHSHRGLIGAARNGCAFDGLSASDDVLSYLPMAWV
GDNLFSYAQAMVAGFTVNCPESRETVMTDLREIGPTYYFAPPRIYENLLTQVMIRMEDAG
WIKRKLFHWAMGVARRCGTDILDGNPVPLAERLRYAAGEALIFGPLRNVLGMSRIRVGYT
AGEAIGPDLFRFYRSIGVNLKQFYGQTETCAYVCLQPDGKVKFDSVGPAAPGMEIRIAEN
GEVLVRGVGLLKAYYKRDDATREAINDQGYFMTGDAGVIDADGHLKIIDRAKDVGKLSDG
AMFAPKYIENKLKFFPYIKEAVAFGTGRDSVCAFINIDFDAVGNWAERRHLAYAGYIDLA
AQPEVIAMIGECVEQVNADLCVDAMLAGSQVSRFLILHKELDPDDDELTRTRKVRRGYIA
EKYASLVEALYAGKPEQFIETRVKFEDGREGSVSATLKLVDVKRFPPATAGAKRAA
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaccgtcggcgacgaccttcccgcgcttgttgctcgcgcatgcgcagcagcgg
ccggaaagcccggcttaccgtgagaaggatctcgggatctggcaaacctatagctgggcg
cagaccgcgcaggaggtgcgcgcgctcgcgtgcggcctggcggccctgggctttgcccgc
ggcatgaacctggcggtggtcggcgacaaccggccgcgcctgtactgggccatgagcgcg
gcgcaggccatgggcggcgtgccggtgccgctctaccaggatgccattgccggcgagatg
atctatgtgctgaacgatgccgagatcgacttcgccatcgtggaggaccaggagcaggtg
gacaagctgctggaggtggaggagcagctagccgcgcagggccgcaaggtgcgccacatc
atctatgaagacccgcgcgggctgcgtgactacgatcatcctgcattgatgtcttaccag
cgcctgcaggaaatcggccgcgagttcgatcgtgccaatccaggatacttcgatgcggcc
gttgccgcgggcgagcctgacgataccgccatcatcctctacacctccggcaccaccggc
aagcccaagggtgtgtgccactcgcatcgcggcctgatcggcgctgcgcgcaacggctgc
gcgttcgatggcctgagcgcaagtgacgatgtgctgtcctacctgccgatggcatgggtg
ggtgacaacctgttctcgtacgcgcaggccatggtggcgggctttaccgtgaactgcccg
gaatcgcgcgagacggtgatgaccgacctgcgcgagatcggccccacctattacttcgcg
ccaccgcgcatctatgaaaacctgctcacgcaggtgatgatccgcatggaagatgcgggc
tggatcaagcgtaagctctttcactgggccatgggcgtggcgcgccgctgcggcaccgac
atcctcgacggcaatccggtgccgctggccgagcgcctgcgctacgcggcaggcgaggcg
ctgatcttcgggccgctgcgcaatgtgctcggcatgagccgcatccgcgtgggctacacg
gcgggcgaggcgatcggcccggacctgttccgcttctatcgctcaatcggcgtcaacctc
aagcagttctacggccagaccgaaacctgcgcctatgtctgcctgcagccggacggcaag
gtcaagttcgattcggtagggcctgccgcgccgggcatggagatccgcattgccgagaac
ggcgaagtgctggtgcgtggcgtgggcttgctgaaggcctactacaagcgcgacgatgcc
acccgcgaggcgatcaacgaccaaggctatttcatgaccggcgacgccggcgtgatcgac
gccgacggccacctcaagatcatcgatcgcgcgaaggacgtgggcaagctgtccgacggc
gccatgttcgcgcccaagtacatcgagaacaagctcaagttctttccctatatcaaggag
gcggtggcgttcggcaccggccgcgacagcgtctgcgcgttcatcaacatcgatttcgat
gccgtgggcaactgggccgagcggcgccacctggcctatgcgggctacatcgacctggcg
gcgcagccagaggtgatcgccatgatcggcgaatgcgtcgagcaagtgaatgccgacctt
tgcgtcgatgccatgctggctggctcgcaggtgtcgcgcttcctgatcctgcacaaggaa
ctcgatccggacgacgatgagctcacccgcacgcgcaaggtgcgccgtggctatatcgcc
gagaaatacgcgtcgctggtcgaagcgctgtacgccggcaagccggagcagttcatcgag
acgcgcgtgaagttcgaggacgggcgtgaaggcagcgtttcggccacgttgaagctggtc
gatgtaaagcgcttccccccggccaccgccggcgcgaagcgcgcagcatga
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