KEGG   Cupriavidus basilensis: RR42_m0440
Entry
RR42_m0440        CDS       T03642                                 
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
cbw  Cupriavidus basilensis
Pathway
cbw03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cbw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RR42_m0440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbw03400]
    RR42_m0440
DNA repair and recombination proteins [BR:cbw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RR42_m0440
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      RR42_m0440
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 DnaJ_CXXCXGXG RsgA_GTPase AAA_23 AAA_21 nSTAND3 AAA_25 Viral_helicase1 cobW DUF1924
Other DBs
NCBI-ProteinID: AJG17853
UniProt: A0A0C4Y4S2
LinkDB
Position
main:complement(474837..477701)
AA seq 954 aa
MEEIRIRGARTHNLKNINLDLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAIAIEQKATSHNPRSTVGTVTEIHDYLRLLFARAGTPYC
PDHNLALQAQSVSQMVDAALALPEDTKLMILAPVVANRKGEHSDLFDTMQAQGFVRFRIR
SGGGTTHEAPAVVYEVDALPKLKKTEKHSIDVVVDRVKVRPDIKQRLAESFETALRLADG
RAIALEIDTSQEHGFSSKFACPICSYSLQELEPRLFSFNNPMGACPSCDGLGQITFFDPK
RVVAFPNLSLASGAIKGWDRRNQFYFQMLQSLAAYYGFELDTAFEDLPAEVQEVVLHGSG
DVEIPFTYMNERGRTTVREHAFEGIIPNLERRYRETDSIAVREELAKYQNNQACPACHGT
RLRTEARHVKLGENDQARAIYEINGWPLRDALTYFLTLDMHGAKREIADKIVKEISARLN
FLNNVGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI
GTLKHLRDIGNSVLVVEHDEDMIRACDYVVDIGPGAGVHGGMIVAEGTPQQIEQSANSLT
GQYMSGARRIEVPKERAAPDEEKLLRIINATGNNLRNVSAEIPVGLLTCVTGVSGSGKST
LINDTLYHAVARHLYGSTAEPAAHDRIDGLEHFDKVINVDQSPIGRTPRSNPATYTGLFT
PIRELFAGVPSAKERGYDPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGK
RYNRETLEVLYKGKNIHEVLDMTVEHAHEFFLAVPVVRRKLKTLLDVGLGYIRLGQSATT
LSGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIELLLKVIHKLRDQGNTVVIIE
HNLDVIKTADWLLDMGPEGGAGGGQVIAKGTPETVAASRASFTGKYLAPLLERS
NT seq 2865 nt   +upstreamnt  +downstreamnt
atggaagaaattagaatccgtggtgcccgtacccacaacctgaagaacatcaatctcgat
ctgccgcgcaacaagctgatcgtgattaccgggctgtccggatcgggcaagtcctcgctc
gccttcgataccctgtacgcggagggccagcgccgctacgtggagtcgctgtcggcctac
gcgcgccagttcctgcagctgatggaaaagccggacgtcgacctgatcgaggggctatcg
cccgcgatcgccatcgaacagaaggcaaccagccacaacccgcgctcaaccgtgggcacg
gtcaccgagatccacgactacctgcggctgctgttcgcgcgcgccggcacgccttactgc
cccgaccacaacctggcgttgcaggcgcaaagcgtctcgcagatggtcgacgccgcgctg
gcgctgccggaagacaccaagctgatgatcctggcgccggtggtggccaaccgcaagggc
gaacactccgacctgttcgacaccatgcaggcgcagggtttcgtgcgctttcgcatccgc
tccggcggcggcaccacgcatgaggcaccggcggtggtctacgaggtggatgcgctgccc
aagctgaaaaaaaccgagaagcattccatcgacgtggtggtggatcgcgtcaaggtgcgc
ccggacatcaagcaacgactggcggaatcgtttgagaccgcgctgcgcctggccgacggc
cgcgccatcgcgctggagatcgacaccagccaggagcacgggttcagctccaaatttgcc
tgcccgatctgctcgtactcgctgcaggaactggagccgcggctgttctcgttcaacaac
ccgatgggcgcctgcccgagctgcgacggcctgggccagatcaccttcttcgaccccaag
cgggtggtggccttccctaacctgtcgctggcctcgggcgccatcaagggctgggaccgc
cgcaaccagttttacttccagatgctgcaaagcctggcggcctactacggcttcgagctc
gatacggccttcgaggacctgccggccgaggtgcaggaagtcgtgctgcacggctcgggc
gacgtggagatcccgttcacctacatgaacgaacgtggccgcaccacggtgcgcgagcat
gccttcgagggcatcattcccaacctggagcgccgctaccgcgagaccgactccatcgcg
gtgcgcgaggagctcgccaagtaccagaacaaccaggcctgccccgcctgccacggtacc
cgcctgcgcaccgaggcgcgccacgtcaagctgggcgaaaacgaccaggcgcgcgccatc
tacgaaatcaacggctggccgctgcgcgacgcgctcacctatttcctgacgctggacatg
cacggcgccaagcgcgagatcgccgacaagatcgtcaaggaaatcagcgcgcgcctgaac
ttcctcaacaacgtgggcctggattacctgtcgctcgagcgcagcgccgacacgctgtcg
ggcggcgaggcgcagcgtatccggctggcgtcgcagatcggctccggcctgaccggcgtg
atgtacgtgctggacgaaccttccatcggcctgcaccagcgcgacaacgaccgcctgatc
ggcacgctcaagcacctgcgcgacatcggcaactccgtgctggtggtggagcacgacgaa
gacatgatccgcgcctgcgactacgtggtcgacatcggcccgggcgccggcgtgcacggc
ggcatgatcgtggccgaaggcacgccgcagcagatcgagcagtcggccaattcgctcacc
gggcagtacatgtccggcgcgcgccgcatcgaggtgccgaaagagcgcgccgcgcccgac
gaggaaaagctgctgcgcatcatcaacgcaaccggcaacaacctgcgcaacgtcagcgcc
gagatcccggtgggcctgctcacctgcgtgaccggcgtgtccggctcgggcaagtcgacg
ctgatcaacgacacgctctaccacgcggtggcgcgccacctgtatggctccacggcggag
ccggccgcgcacgaccgcatcgacgggctggagcatttcgacaaggtcatcaacgtcgac
cagagcccgatcggccgtaccccgcgctccaaccctgctacgtacaccggcctgttcacg
ccgatccgcgagctgttcgcgggcgtgccctccgccaaggagcgtggctacgatccgggc
cgcttctcgttcaacgtcaagggcgggcgctgcgaggcctgccagggcgatggcgtgatc
aaggtcgagatgcatttcctgccggacgtgtacgtgccttgcgacgtctgccacggcaag
cgctacaaccgcgaaacgctggaggtgctctacaagggcaagaacatccacgaagtgctc
gacatgacggtagagcacgcgcacgagttcttcctggcggtccctgtcgtgcggcgcaag
ctcaagacgctgctggacgtgggccttggctatatccggctgggccagtccgccaccacg
ctctcgggcggcgaggcgcagcgcgtcaagctgtcgctggagctgtccaagcgcgacacc
gggcgcacgctctacatcctggacgagcccaccacgggcctgcacttccacgatatcgag
ctgctgctcaaggtcatccacaagctgcgcgaccagggcaacaccgtggtcatcatcgag
cacaacctggacgtgatcaagaccgcggactggctgctcgacatgggcccggagggcggc
gcgggcggtggccaggtaatcgccaagggcacgccggaaacggtggcggcaagccgcgcg
agcttcaccggcaagtacctggcgccgctgctagagcgcagctga

DBGET integrated database retrieval system