Cupriavidus basilensis: RR42_m0963
Help
Entry
RR42_m0963 CDS
T03642
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cbw
Cupriavidus basilensis
Pathway
cbw03030
DNA replication
cbw03430
Mismatch repair
cbw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RR42_m0963
03430 Mismatch repair
RR42_m0963
03440 Homologous recombination
RR42_m0963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbw03032
]
RR42_m0963
03400 DNA repair and recombination proteins [BR:
cbw03400
]
RR42_m0963
Enzymes [BR:
cbw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RR42_m0963
DNA replication proteins [BR:
cbw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RR42_m0963
DNA repair and recombination proteins [BR:
cbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RR42_m0963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AJG18374
UniProt:
A0A0C4Y829
LinkDB
All DBs
Position
main:1034185..1037697
Genome browser
AA seq
1170 aa
AA seq
DB search
MSAPRFVHLRLHSEYSVVDGIVRLDDAVKAAAADGMGALALTDLANAFGLIRFYKEARGG
GIKPVVGADVWLTNADDRDKPTRLLLLVRDRIGYLNLCVLLSRAWLSNQYRGRAEIDPAW
FDEAGEEGQPLATGLIALSGAMGGDIGMALANGNDAAAAQAAAHWAKVFPQCFYIELQRA
GLPGTDAYVQQAVQLAARMGLPVVATHPVQFMTPDDFTAHEARTCIAEGELLANPRRVRR
FTTDQYFKTQDEMCALFADIPSALENAVQIARRCNLTLELGKPRLPLFPTPDGMSLDDYL
VHLAKEGLEKRMAVLFPDEAVREAKRPEYYARLEFETGTIIKMGFPGYFLIVADFINWAK
NNGVPVGPGRGSGAGSLVAYALGITDLDPLKYALLFERFLNPERVSMPDFDIDFCQQGRD
RVITYVKEKYGHAAVSQIATFGTMAAKAAVRDVGRVLDLGYGFVDGIAKLIPFKPGKLVT
IEEAKKEEPLLTEREKNEEEVRQLLELAQRVEGMTRNVGMHAGGVLIAPGKLTDFCPLYT
QGAQNDGMSGVVSQYDKDDVEAAGLVKFDFLGLTTLTILDWAERYIRRLDPSMADWNCSH
IPLDDSKAFDILKTANTVAVFQLESRGMQGMLKDAKPDRFEDIIALVALYRPGPMDLIPS
FCARKHGREKVEYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKK
KAEEMAQHRELFREGAAKNGLTAEKADDTFDLMEKFAGYGFNKSHAAAYALLAYYTAWLK
AHHPAAFMAANMSLAMDDTDKVKILFDDCKLNKLQVLPPDVNASEYRFAPTDAKTIRYGL
GGIKGSGQGAIEDILRAREEKPFADLFDFCERVDRRQVNRRTIEALIRAGAFDSLNANRG
QLLASVSRAMEAAEQKAESANQVSLFDLMADAGESHRPALVDEPAWAPKRMLQEEKQALG
YYFSGHLFDAYRDEVGRFLKGTLAGLEKEVQGNGGGYGRDVRGKVIAGVITGMRTQMTQR
GKMLIVLLDDGTGQVEMTVFNELFDANRHMFREDEMVIVQGNARHDTFTGGVRFTAESVM
DLVAARAKYAEAVGLAFNGNASTELLRELLTPYLASVANAPGVPVRVSYATTGARCEAEL
GRQWLVTPSDDALASFRAALSGENVRMLYG
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcacctcgcttcgttcatctccgtcttcattccgaatactccgtcgtcgacggc
atcgtgcgcctggacgatgccgtcaaggctgcggccgccgatggcatgggcgcgctcgcc
ctgaccgacctggccaatgccttcggcctgatccgcttctacaaggaagcgcgcggcggc
ggcatcaagcccgtggtcggcgccgacgtctggctgaccaacgccgacgatcgcgacaag
ccgacgcgcttgctgctgctggtccgggaccggattggctacctcaatctctgcgtgctg
ctgtcgcgcgcgtggctttccaaccagtaccgcggccgcgccgagatcgaccctgcctgg
ttcgacgaagccggcgaagagggccagccgctggccaccggcctgattgcgctgtctggc
gcgatgggtggcgacatcggcatggcgctggccaatggcaacgatgcggccgcggcgcag
gccgcggcgcattgggcaaaggtgttcccgcagtgcttctacatcgagttgcagcgcgcg
ggcctgcccggcaccgatgcctatgtgcagcaggcggtgcagctggcggccaggatgggc
ttgccagtggtggcgacgcacccggtgcagttcatgacgcccgacgatttcacggcgcac
gaggctcgcacctgcatcgccgaaggggagttgctggccaacccccgccgcgtgcgtcgc
ttcaccaccgaccagtatttcaagacccaggacgagatgtgcgcgctgttcgccgacatc
ccgtccgcgctggaaaacgcggtgcagatcgcgcgccgctgcaacctcacgctggaactg
ggcaagccgcgcctgccactgtttccgacgcccgacggcatgtcgctcgacgactacctc
gtgcacctggccaaggaaggcctggaaaagcgcatggcggtgctgttccccgacgaagcc
gtgcgcgaggccaagcgccccgagtactacgcgaggctggagttcgagaccggcaccatc
atcaagatgggcttccccggctacttcctgatcgtggcggactttatcaactgggccaag
aacaacggcgtgccggtcgggccgggacgcggctccggcgccggttcgctggtggcctat
gcgctcggcatcaccgatctggacccgctcaagtacgcgctgctgttcgaacggttcctg
aacccggaacgggtttcgatgcccgacttcgacatcgacttctgccagcagggacgtgat
cgcgtgatcacgtacgtgaaggagaagtacggccacgccgcggtatcgcagatcgccacc
ttcggcaccatggccgccaaggccgcggtgcgcgacgtgggccgcgtactcgacctgggc
tatggctttgtcgacggcatcgccaagctgatccccttcaagccgggcaagctcgtcacc
atcgaggaggccaagaaggaagagccgctcctgaccgagcgcgagaaaaacgaagaggaa
gtgcgccagttgctggagctcgcccagcgcgtggaaggcatgacacgtaacgtcggcatg
cacgccggcggcgtgctgatcgccccgggcaagctgacggacttctgcccgctctacacc
cagggtgcgcagaacgacggcatgagcggtgtggtcagccagtacgacaaggacgacgtg
gaagccgccggcctggtcaagttcgacttcttgggcctgaccacgctgaccatcctggac
tgggccgagcgctatatccgcaggctcgatccgtccatggccgactggaactgcagccac
atcccgctcgacgacagcaaggcattcgacatcctcaagacggccaacacggttgccgtg
ttccagctggaaagccgcggcatgcagggcatgctgaaggacgccaagcctgaccgcttt
gaggacatcatcgcgctggtggcactctaccgcccgggcccgatggacctgatccccagc
ttctgcgcccgtaagcacggccgcgagaaggtggagtacccggacccgcgcgtcgagccg
gtgctcaaggagacctacggcatcatggtctaccaggagcaggtgatgcagatggcgcag
atcatcggcggctactcgctgggcggcgccgacttgctgcgccgcgccatgggcaagaag
aaggccgaggaaatggcccagcaccgcgagctgttccgcgagggtgcggccaagaatggc
ctgaccgccgagaaggcggacgacaccttcgacctgatggaaaagttcgcgggctacggc
ttcaacaaatcgcacgcggccgcttacgcattgctggcctactacacggcctggctcaag
gcgcaccacccggccgcgttcatggcagcaaatatgtcgctcgccatggacgacaccgac
aaggtcaagatcctctttgacgattgcaagctcaacaagctccaggtgctgccgcctgac
gtcaacgccagcgaataccgcttcgcgccgaccgatgccaagaccatccgctacggcctt
ggcggcatcaagggctcggggcagggcgccatcgaggacatcctgcgcgcccgcgaggaa
aagccctttgccgacctgttcgatttctgcgagcgcgtcgaccgccgccaggtcaaccgc
cgcaccatcgaggcgctgattcgcgccggtgccttcgacagcctgaacgccaatcgcggc
cagctgcttgcctcggtgtcgcgcgccatggaagccgccgagcagaaggccgagtcggcc
aaccaggtgtcactgttcgacctgatggccgacgccggcgaatcgcaccggcccgcgctg
gtcgacgagccggcctgggcgcccaagcgcatgctgcaggaagaaaagcaggcgctgggc
tattacttctccggccacctgttcgacgcctaccgggacgaagtcggccgcttcctcaag
ggcacgctggccggcctggaaaaggaagtgcaaggcaatggcggcggctatggccgcgac
gtgcgtggcaaggtcatcgccggtgtcatcaccggcatgcgcacccagatgacgcagcgc
ggcaagatgttgatcgtcttgcttgacgacggtaccggccaggtcgagatgacggtgttc
aacgaattgttcgacgccaaccgccatatgttccgcgaggacgagatggtgatcgtgcaa
ggcaacgcccgtcacgatacctttaccggtggcgtgcgcttcaccgccgaatcggtgatg
gacctggtggcggcgcgtgccaagtacgccgaggcggtcggcctggcgttcaacggcaat
gcctccacggaactgctgcgcgagttgctcacgccctacctggcgagtgtggccaatgcg
ccaggcgtgccggtgcgcgtgagctacgccaccaccggcgctcgctgcgaggcggaattg
gggcggcagtggctggtcacgccatccgacgatgccctggcaagcttccgcgcggccctg
tccggcgaaaacgtccgcatgctctacggctga
DBGET
integrated database retrieval system
