Cupriavidus basilensis: RR42_m1922
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Entry
RR42_m1922 CDS
T03642
Name
(GenBank) L,D-transpeptidase YcbB
KO
K21470
L,D-transpeptidase YcbB
Organism
cbw
Cupriavidus basilensis
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cbw01002
]
RR42_m1922
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbw01011
]
RR42_m1922
Peptidases and inhibitors [BR:
cbw01002
]
Cysteine peptidases
Family C82
RR42_m1922
Peptidoglycan biosynthesis and degradation proteins [BR:
cbw01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
RR42_m1922
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AJG19317
UniProt:
A0A0C4Y2F3
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All DBs
Position
main:complement(2022881..2024518)
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AA seq
545 aa
AA seq
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MPAAGGLMRGACRIRRNGVAAPRVLAGLVAAWALSCHGIALAAPSAPSALWFSQGHPNAL
AWQAAGILDGATADGLEPRDYDADGLRRALGQAADGLPLAPEAAASLDERLTAAMQRYLA
DLHGGRVDPGTIHEKFAPAPDRQFDSSRLLRAAIAGQDLPEAVRQAAPSFPLYASLRAAL
SRYRALAGHPAWQAPLPPLPGRKLVPGQAYAGLPVLAQRLIALGDLPAATPVPQHYQGEL
VEGIKAFQVRHGLAPDGAIGAGTFAQLNAPLAGRVRQIELTLERLRWTPLLEGPRMIVVN
VPEFVLRAYEIHDGAIQVKVEMKVIVGKALDTRTPLFKEDMRFIEFSPYWNVPPSIARAE
TVPRLRRDPGYFERQGFEFVSGDAKVITTLSAASLDAVQRGQLRIRQRPGPMNALGDIKF
VFPNNENIYLHHTPTPQLFARDRRDLSHGCIRVEAPVALAGFVLQDTPGWTEARIREAME
KGESSTLRLRQPLPVVLAYGTAIVKADARVYFFPDIYGLDSVLDEALRQRSARLRASALA
STQAR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgccggcggcgggcgggctgatgcgaggcgcttgccggatccgacgcaacggcgtggcc
gcgccccgggtcctcgccggcctggtggctgcgtgggccttgagttgccatggcattgcg
ctggccgcgccctccgcgccctctgcgctctggttttcgcagggtcatcccaatgccctg
gcctggcaggccgccggcatcctggacggcgccacggccgacgggctggaaccccgcgac
tatgatgccgacggcctgcgccgcgcgctgggccaggccgcggatgggctgccgctggcg
cccgaagccgccgcctcgcttgacgagaggctgacagcggcgatgcagcgctatctcgcc
gacctgcacggcggccgggtcgatcccggcacgatccacgagaaatttgccccggcgccg
gaccggcagttcgattcgtcgcgcctgctgcgcgcagccatcgccggacaggacctgccc
gaggcggtccggcaggcggcgccgtcgttcccgctctacgcaagcctgcgcgcggcgctt
tcacgttaccgcgcgctggccggccacccggcctggcaggcaccgctgccgccgctgccc
ggcaggaagctggtgcccgggcaggcctacgccgggctgccggtgctggcacagcgcctg
atcgcgctcggcgacttgcccgccgccacgcccgtcccgcaacactatcagggcgaactg
gtggagggcatcaaggcgttccaggtccgccacgggctggcaccggatggcgccatcggc
gcgggcacgttcgcgcaactgaatgcgccgctcgccggccgcgtacggcagatcgaactg
acgctggagcgcctgcgctggacgcccctgctggagggcccgcgcatgatcgtggtcaac
gtgccggagttcgtgttgcgcgcctacgaaatccacgacggggccatccaggtcaaggtg
gaaatgaaggtgatcgtgggcaaggcgctcgatacgcgcacgccgctgttcaaggaggac
atgcgcttcatcgaattcagtccttactggaacgtgccgccgtccatcgcgcgcgcggaa
accgtgccccggctgcgccgcgatcccggctatttcgagcggcaaggcttcgagttcgtc
agtggcgacgccaaggtgatcaccaccttgtcggccgccagcctggatgccgtccagcgc
ggccagctgcgcatacggcaacgcccagggccgatgaatgcgcttggcgacatcaagttc
gtcttccccaacaacgagaacatctacctgcatcacacacccaccccgcaactgttcgcg
cgggaccggcgcgacctgagccatggctgcatccgtgtcgaggcaccggtggcgctggct
ggcttcgtgctgcaggacacgcccggctggaccgaggcgcgcatccgcgaggccatggag
aagggagaatccagcacgctgcggctgcgccagcccctgccagtggtgcttgcgtacggc
acggccatcgtcaaggccgacgctcgcgtctacttcttcccggatatctatggactggac
agcgtgcttgacgaggcgctacggcaacggtccgcccgcctgcgggcttccgccttggcc
agcacgcaggcaagatag
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