Cupriavidus basilensis: RR42_m1989
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Entry
RR42_m1989 CDS
T03642
Name
(GenBank) Biofilm PGA synthesis deacetylase PgaB
KO
K11931
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
Organism
cbw
Cupriavidus basilensis
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Gene cluster
GFIT
Motif
Pfam:
GHL13
Polysacc_deac_1
RDM
Motif
Other DBs
NCBI-ProteinID:
AJG19384
UniProt:
A0A0C4YAV1
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Position
main:2101634..2103679
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AA seq
681 aa
AA seq
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MQKLNRRTFIGLAGALSVTNSVHAGYALSLLPPQDRDDGLTFRVLAFHDIRDDLRADVGT
VADTCAISTATLNNIFAWLKGNDFHPVSVDQIIASRNGGPRLPQRAVLLTFDDAYKSQYT
KAFPLLQQYNYPGLVAVVSRWTSTPQDEPVRISHKSVMAPGYFMSWDNLREMAESGLVEI
ASHTHDMHHGAVANPQGNELPAASAHLYHADLKRYETDQEYESRVGGDLKTCSDMIQAKT
GVRVRSMVWPYGMYNAALIGASHKLGMNVHFTLDDGPNTPEVPLTKVRRLLVSYDWDAGV
MMGQFRQQSAYRGDNQPVERVVNVSLDDVYDPNPDRQEARLSRLIDRIKDLEPKSVYLQA
FHDPDGSGTAQALYFPNRHMPVRGDLFSRAAWQLITRAGVQVYAALPVLAYKLPAGHPAS
SRLVAVMPGAPATPFDPRQRQRLSPFDPLARSVIRDIYYDLGRYTSLNGIVFGDDASLSD
IEDAGDAALAAYADWGLPRGLAAIRANPDLLQRWSDAKLRYLIDFTRQLGDLVKDYQGGG
NVLTVRSLPANAVLRPDASMRLAQDIDAFAAQYDFVNLMAYADARGGPPSTPWLEGLARA
VAAHPGALPKTIFALQTLDGRTQAPVATTALRDQMQRLRMAGVKHLGYCPDQFMVNQPDL
AVLRDVMSMQNLVRPRNGMKV
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagctcaatcgccgaacattcatcgggctcgccggcgcgctgtctgtgaccaat
agcgtccacgccggctatgcgctgtccttgctgccgccgcaggatcgcgacgacggactg
accttccgcgtactcgcgtttcacgacatccgggacgacctgcgtgcggatgtgggaacg
gtggcagatacctgcgcgatcagcaccgccacgctcaacaatatcttcgcctggctcaag
ggcaacgacttccacccggtcagcgtcgaccagatcatcgcttcgcgcaacggcggccca
cgcctgccgcagcgcgccgtgctgctgaccttcgacgatgcctacaagagccagtacacc
aaggcctttccgctcttgcaacagtacaactaccccggcctggtcgccgtggtgtcgcgc
tggaccagtacgccccaggacgaaccggtgcgcatcagccataagtcggtgatggcgcca
ggctatttcatgagctgggacaacctgcgcgagatggctgagtctggtctggtggagatc
gcctcgcacacgcacgacatgcaccacggtgccgtggccaaccctcagggcaacgaacta
ccggcggccagcgcgcacctctaccatgccgacctgaaacgctacgaaaccgaccaggaa
tacgaaagccgggtcggtggcgacctgaagacgtgctcggacatgatccaggccaagacc
ggggttcgggtgcgctcgatggtctggccctacggcatgtacaacgcggcgctgatcggt
gcctcgcacaaactgggcatgaatgtccacttcaccctcgacgacgggcccaatacgccc
gaggtgccgttgaccaaggtcaggcgcctgctggtctcctacgactgggatgcgggtgtc
atgatgggccagttccggcagcagtcggcctatcgcggcgacaaccagccggtcgaacgg
gttgtcaacgtctctctcgacgacgtgtacgatccgaaccccgatcgccaggaagccagg
ctgtcgcggctgatagatcggatcaaggatcttgagcccaaatcggtctacctgcaggcg
tttcacgatcccgacggcagcggcaccgcccaggcgctctactttcccaaccgccacatg
ccggtgcgcggcgacctgttctcgcgcgcggcctggcagctgatcacccgagctggcgta
caagtctatgcggcattgccggtgcttgcctacaagctgcccgcgggccatccggcctca
tcgcggctggtagcggtgatgccgggcgcgccggccacgcccttcgacccgcgccagcgg
caacggctcagccccttcgacccgctcgcccgcagcgtgatccgcgatatctactacgac
ctgggcaggtacaccagtctgaatggcatcgtgtttggcgatgacgcgagcctgagcgat
atcgaagacgcgggcgacgcagcgcttgccgcctacgcagactgggggttgccgcgcgga
ctggctgcgatccgtgccaaccccgatctgctgcaacgatggtcggacgccaagctccgg
tacctgatcgactttacgcggcaactgggcgacctggtcaaggactatcagggcggcggc
aatgtgctgaccgtgcgcagcctgcctgccaatgcggtgctgcgccccgatgcgagcatg
cgcctggcccaggacatcgatgcgttcgccgcgcaatacgacttcgtcaacctgatggcc
tacgcggacgccagaggcggcccgccttcgacgccctggctggagggcctggcccgcgcc
gtagcggcgcatccgggcgcgctgccgaaaaccatcttcgcgttgcagacactcgacggc
cgtacccaggcgccggtcgccaccaccgcgctacgcgatcagatgcagcgcctgcgcatg
gctggcgtgaagcacctcggctactgccccgaccagttcatggtgaaccagccagacctg
gcggtgctgcgggatgtcatgtcgatgcagaacctggtgcgaccgcgcaatggcatgaag
gtttag
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