Cupriavidus basilensis: RR42_m2696
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Entry
RR42_m2696 CDS
T03642
Name
(GenBank) Helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cbw
Cupriavidus basilensis
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbw03400
]
RR42_m2696
Enzymes [BR:
cbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RR42_m2696
DNA repair and recombination proteins [BR:
cbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RR42_m2696
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AJG20081
UniProt:
A0A0C4YHB7
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All DBs
Position
main:complement(2868325..2871240)
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AA seq
971 aa
AA seq
DB search
MTSLQFRPGPDFLPQAAAAAWYFLDHCGEQQAAAHVVVPTAAQIPGVRQALDAAARAAGK
PRLLPRVVTIGHWLLDLPPDPIPVRSHAARLLAVQQAIRAQDWLRRAFGAQTEAAAWGLA
QTLLAISDELSARWLDDDAIRDEDVDGDDRAALLQGALERTYAHLSSRFLGEEARIVMAF
WQALSGPDDPLPARRRALHRLAQHLDGPVIWLGPTPPQPIEEAFLRQAAELVPVIRIGYD
WTAQSAQAPSGALDAGLGDEDGEPDWYDTLLALWPEARLPGPNEAAARRAPRSLPAERPR
VRVIGSARFEDEAGAAAGQLVQWLNEGRRHVALVAHDRVVARRARALLARAGAPVRDETG
WKLSTTRAAAALMRWFDLLNQDGDTSALLDLLKSPFCLPDFALRGEAIAALERQIRRDGI
SGGWRRLQQRFRPDTADQASGDGNAGDAAQDDARRAARQAACELVQHLAAEAGAWPRGNA
QHPVSTWLERLDATLDVLGMREALSADDAGTQLLDALARLADLPQDETGALATLDLGEFR
SMLSALLESVAYKEPSASGAARITILPLNGARMRRFDGVVVVGCDDTQLPSSAAELMFFS
NQMRRELALEDREVRFAQQARDLAEVLLNNDDVVLTWQRLGARGEPKHVSGWIERLSALC
ARAGAPIEASALPVLHETFAEVDGMPAPAASELVPSRWSAQAYNMLRRCPYQFFAGRMLG
LAGLEVVSDDLEKRDIGELLHRVLLRYHREASQDGLRREDARLARLREISDHEFGALMKE
DGNAIGYYRRWCEVLPSYVAWQAEREAQGWFWDDGELDATVDLPMPDGQPLRVNGRIDRL
DRARDGSRAVLDYKTQTVLRLKRKVGDVEEDCQLPFYGLLRADVAAGSWVALEGAKDGPP
APQREVSLPDFDAAVVWLEQQLRSDVMRLRQDAPLPAFGDASACTYCTARGLCRKGFWES
TALPPGIGGRA
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgctgcaatttcgtcccggccccgacttcctgccgcaggccgccgccgcggcc
tggtatttcctcgaccattgcggggagcagcaagccgccgcgcatgtggtggtgcccacc
gcggcgcagatccccggcgtgcgccaggcgctggatgccgccgcgcgcgcggccggcaag
ccgcggctgctgccgcgggtcgtcaccattggccactggctgctcgacttgccgcccgac
ccgatcccggtgcgcagccatgcggcgcggctgctggccgtgcagcaggccatccgtgcg
caggactggctgcggcgcgcatttggcgcgcagaccgaggccgcggcgtgggggttggcg
cagacgctgctcgccatcagcgatgaactgagcgcgcgctggctcgacgatgacgccatc
cgcgatgaagacgtcgatggggacgatcgcgcggccctgctgcagggcgcgctggagcgg
acctacgcgcatctgtcttcccgcttcctcggtgaggaggcgcgcatcgtgatggccttc
tggcaagccttgtccggcccggacgatccgctgcccgcgcgccggcgcgcgctgcaccgg
ctggcccagcacctggacggcccggtcatctggctcgggccaacgccgccccagccgatc
gaggaagcgttcctgcggcaggccgccgagctcgtgccggtgatccgcatcggctacgac
tggactgcgcagtccgcgcaggcgccgagcggcgcgcttgatgccggtttgggcgatgag
gacggggagcccgactggtacgacaccttgctggcactgtggcccgaggcgcggctgcct
ggcccgaatgaagctgccgcgcgccgcgcgccacgcagcctgccggccgagcgcccgcgc
gtgcgcgtgatcggcagcgcgcgcttcgaggacgaggccggcgctgccgccgggcagctg
gtgcagtggctcaacgaaggccgccgccacgtggcgctggtggcgcacgatcgcgtagtg
gcgcggcgcgcgcgcgcgttgctggcgcgtgccggcgcgccggtgcgcgacgaaaccggc
tggaagctctcgaccacgcgcgccgcggctgcgctgatgcgatggttcgacctgctcaac
caggacggcgatacctctgccctgctcgacctgctgaagagcccgttttgcctgccagac
tttgcattgcgcggggaggccattgccgcgctggagcggcagatccggcgagacggcatc
agcggtggctggcgccgcttgcagcagcgcttccgccccgatacggctgaccaggccagc
ggcgatggcaatgccggcgacgccgcgcaagacgacgcgcgccgcgccgcccggcaggcc
gcttgcgagctggtgcagcaccttgcggccgaagccggcgcctggccgcgcggcaacgca
cagcacccggtctcgacctggctggaacgcctcgatgccacgctggatgtgctcggcatg
cgcgaggccttgtctgccgacgatgcgggcacacaactgctcgatgcgctggcgcgtctt
gccgacctgccgcaggacgagaccggtgcgctggccacactcgatctcggcgaattccgc
tccatgctgtcagccttgctagagtcggttgcctacaaggagccctcggccagcggcgcc
gcgcgcatcacgatcctgccgcttaacggcgcgcgcatgcgccgcttcgatggggtcgtg
gtggtggggtgcgatgacacgcagcttccctccagcgcggccgagctgatgttcttctcc
aaccagatgcggcgtgagctcgcactggaagaccgcgaggtgcgcttcgcccagcaggcg
cgagacctggccgaggtcctgctgaacaacgacgacgtggtgctcacctggcagcgcctt
ggcgcgcgtggcgagcccaagcatgtgtcgggctggatcgagcggctcagcgcgctgtgc
gcgcgcgcgggcgcgccgatcgaggcgagcgcgttgccggtgctgcacgagaccttcgcc
gaggtggacggcatgcccgcgccggcggcatcggagctggtgccttcgcgctggagcgcg
caggcgtacaacatgctgcgccgctgcccctaccagttttttgccggccgcatgctcggg
ctggcggggctggaagtcgtcagcgacgacctggaaaaacgcgacatcggcgagctgctg
caccgcgtgctgctgcgttaccaccgcgaagcctcgcaggacggcttgcgccgtgaagat
gctcggctggcgcgcctgcgcgagatttccgatcacgagttcggcgcgctgatgaaggaa
gacggcaacgccatcggctactaccgccgctggtgcgaagtgctgccatcctacgtggca
tggcaggcggagcgcgaggcgcagggctggttctgggacgatggcgagctcgatgccact
gtcgacctgcccatgcccgacggccagccgctgcgcgtcaatggccgcatcgaccggctg
gatcgcgcgcgcgacggcagccgcgcggtgcttgattacaagacccagaccgtgctgcgc
ttgaagcgcaaggtcggggacgtggaagaggattgccagttgccgttctatggattgctg
cgcgccgacgttgccgctggcagctgggtggcgctcgaaggcgcgaaggacgggccgccg
gcgccacagcgcgaagtgagcctgcctgacttcgacgccgcagtggtgtggctcgaacaa
caattgcgcagcgacgtgatgcgcctgcgccaggatgcgccgttgccggccttcggggac
gccagcgcgtgcacctactgcaccgcccgcggcttgtgccgcaagggcttctgggaaagc
acggcgttgccgccggggatagggggccgcgcatga
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