Cupriavidus basilensis: RR42_m3069
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Entry
RR42_m3069 CDS
T03642
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbw
Cupriavidus basilensis
Pathway
cbw03420
Nucleotide excision repair
cbw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RR42_m3069
03430 Mismatch repair
RR42_m3069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbw03400
]
RR42_m3069
Enzymes [BR:
cbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RR42_m3069
DNA repair and recombination proteins [BR:
cbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RR42_m3069
MMR (mismatch excision repair)
Other MMR factors
RR42_m3069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
UPF0181
Motif
Other DBs
NCBI-ProteinID:
AJG20439
UniProt:
A0A0C4YED3
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All DBs
Position
main:complement(3263648..3266011)
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AA seq
787 aa
AA seq
DB search
MSDLLANLNAEQLAAVTLPDEPALILAGAGSGKTRVLTTRIAWLIQNGRVSPAGLLAVTF
TNKAAKEMMTRLTSMLPINTRGMWIGTFHGLCNRMLRAHYRDAGLPQTFAILDSQDQLSA
LKRLLKSLNVDDEKYPAKNLQYFINNAKEQGLRPADVEANDDFNRRFVDLYAAYDVQCQR
EGVVDFAELLLRCYELLRYNDAIRQHYQHRFRHVLVDEFQDTNVLQYRWLKMLAGFGTQN
PAAVFAVGDDDQSIYAFRGANVGNMRDFEHEFRVRHMIKLEQNYRSHGHILDSANHLIAH
NSRRLGKNLRTDAGHGEPVRVYQAGTDGQEAGWIVEEIRDLIAQGMSRSEIAILYRSNAQ
SRVIEHALFSASISYRVYGGLRFFERAEVKHALAYLQLLENPRNDAAFGRVVNFPTRGIG
ARSLEALQDAARQYNCSLAEAVAFVPGKAGSTLGAFVRLIEQMRAETRRMTLPETVEYVT
NTSGLITHYRAEKEGQDRIENLQELVTAAQAFVTEEGFGLDALASAIPVGRDGAQPLPAL
AEGDQAQQVLDPEALPVVMTPLVAFLTHASLEAGDNQAQAGQDAVQMMTVHAAKGLEFNA
VFITGLEEGLFPHENSATEADGLEEERRLMYVAITRARERLYLSFAQSRVLHGQMRYHVR
SRFFEELPEESLKWLMPPAQAYGGGGSQRRQQNEGGWGRDWFKKAEDVPYSGTQPTGGMD
TGNGYADAKRQAGSGLRIGQSVFHNKFGEGVIAGLEGEGDAARANIKFKRHGAKWLVLSV
AKLDPID
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctgcttgccaatctcaatgccgaacaactagccgccgtcactttgcctgac
gagccggcgctgatcctggctggcgcgggcagcggcaagacgcgtgtgctgaccacccgc
atcgcgtggctgatccagaacggccgggtgtcacccgccggcctgctggcggtgaccttt
accaacaaggccgccaaggagatgatgacgcggctgacgtcaatgctgccgatcaacacg
cgcggcatgtggatcggcacgttccacgggctgtgcaaccgcatgttgcgcgcgcattat
cgcgatgccggcctgccgcagacctttgccatcctcgacagccaggaccagctctccgcc
ctcaagcgcctgctcaagtcgctgaacgtggatgatgagaagtacccggccaagaacctg
cagtacttcatcaacaacgccaaggagcaaggcctgcgcccggccgatgtggaggccaac
gacgacttcaatcgccgctttgtcgatctctacgccgcctacgatgtgcagtgccagcgc
gagggcgtggttgatttcgccgagctgctgctgcgctgctacgagctgctgcgctacaac
gacgcgatccgccagcactaccagcaccgcttccgccatgtgctggtggacgagttccag
gacaccaacgtgctgcagtaccggtggctcaagatgctggctggctttggcacgcagaac
ccggccgcggtattcgcggtcggcgacgacgatcagagcatctacgcgttccgtggcgcc
aatgtcggcaacatgcgcgacttcgagcatgagttccgcgtgcgccacatgatcaagctg
gagcagaactaccgctcccatggccacatcctggattcggccaaccacctgattgcccac
aattcgcgccgcctgggcaagaacctgcgcaccgatgccggccacggcgagccggtgcgg
gtgtaccaggccggcaccgacggccaggaggccggctggatcgtggaggaaatccgtgac
ctgatcgcacagggcatgagccgctcggagatcgccatcctctaccgcagcaatgcccag
tcgcgggtgatcgagcacgcgctcttctcggccagcatttcctatcgcgtgtacggcggc
ttgcgcttcttcgagcgcgccgaagtcaagcacgcgctggcttacctgcagttgctggag
aacccgcgcaacgacgctgccttcggccgcgtggtgaatttccccacgcgcggcatcggc
gcgcgctcgctggaagccctgcaggatgcggcgcgccagtacaactgctcgctggccgaa
gccgtggccttcgtgcccggcaaggccggcagcacgctgggcgcctttgtgcggctgatc
gagcagatgcgcgccgagacgcgccgcatgacgctgccggaaacagtcgagtacgtgacc
aacaccagcggcctgatcacgcactaccgcgcggaaaaggaaggccaggaccgcatcgag
aacttgcaggaactggtgacggcggcgcaggcgttcgtgacggaggaaggctttgggctg
gacgcgctggccagcgcgattccggtcgggcgcgatggcgcgcagccgctgcccgcgctg
gccgagggcgaccaggcccagcaggtgctggatcccgaggcgctgccggtggtgatgacc
ccgctggtggcctttctcacccatgcctcgctggaagccggcgacaaccaggcgcaggcg
ggccaggacgccgtgcagatgatgacggtgcatgccgccaaggggctggagttcaatgcg
gtcttcatcaccgggctggaagaaggactgttcccgcacgagaacagcgccaccgaggcc
gacgggctggaggaagagcgccgcctgatgtacgtggccatcacgcgcgcgcgcgagcgg
ctctatctctcgttcgcgcaaagccgcgtgctgcatgggcagatgcgctaccacgtgcgc
tcgcgcttcttcgaggagctgcccgaggaatcgctcaagtggctgatgccgcctgcgcag
gcctatggcggcggcggttcgcagcgccgccagcagaacgagggcggctggggccgcgac
tggttcaagaaggccgaggacgttccctattcgggcacccagcctaccggcggcatggac
accggcaacggctatgcggatgccaagcgccaggccggctccggcttgcgtatcggccag
agcgtgttccacaacaagtttggcgaaggcgtgatcgccgggctcgaaggcgagggcgat
gccgcccgcgcgaatatcaagttcaagcgccacggcgccaaatggctggtgctgtcggtc
gccaagctggacccgatcgactga
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