Cupriavidus basilensis: RR42_m3159
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Entry
RR42_m3159 CDS
T03642
Name
(GenBank) Type IV fimbrial biogenesis protein PilY1
KO
K02674
type IV pilus assembly protein PilY1
Organism
cbw
Cupriavidus basilensis
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cbw02044
]
RR42_m3159
02035 Bacterial motility proteins [BR:
cbw02035
]
RR42_m3159
Secretion system [BR:
cbw02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
RR42_m3159
Bacterial motility proteins [BR:
cbw02035
]
Pilus system
Pilus assembly proteins
RR42_m3159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
AJG20528
UniProt:
A0A0C4YC79
LinkDB
All DBs
Position
main:3349352..3354169
Genome browser
AA seq
1605 aa
AA seq
DB search
MTQQARFRPVTGLQLLLAIASAILAVASACAAQLSLATRPLYAGGNVPPMVMIDLSKDHT
LHQKAYNDYTDLNGDGVLDTTYTNSIDYAGYFDSYKCYTYDGSTQHAFVPSAVTADKYCN
GSTWSGNFLNWASMSRIDEVRKILYGGFRSTDTATTTVLERAFLPMDAHAWAKFYNGSDV
SKLVPLTVEAAGPTLTSSTTVTVAANVITGIKLSSVANISIGDQIVMTANSPAPANTTLT
GWVMSVDTSSNKTISLAVYPDGVSKPSGAASSYNSWAVTNLTRGGLTICNVTPKDSSNVN
SQSNTQAPQLRVVSGNYATWGASEKWQCNWSEEQNNTQSSFLTKINGTSVTGSSNGNRAA
LSGINASAENPVKAARALGTGESSGTFNARVQVCVPGLLGTENCKQYGSSSYKPFGLLQK
YGESGQMLFGLMTGTYDKNISGGVLRQNVVNFSQEVDPTNGTFTYAASSPVKGIVWNVNK
LRPYGYSYSDGSYVNADSCNYQQTSIVPSGGSTSQNQPANEGNCSTWGNPISEIYLESLR
YFAGKTANSSFTPKSSGSKDAALNLTTPAWANPMDLPSSNANKAPYCTPLNTLVFNSSVS
SYDNDQLAGFTDLNTADTNSTWTDKVGAGEGINGGSWFMGGINGGLIDNLCSGKTISKLS
DVLGICPEGPSQKGTLQIAGAALYAHMNRIRSTSQAATLGVPTADTTSLKVTTYAVQLAT
NTPKINVNVGGKTVTIMPAYQLHPQSPNSVTADASSGTLVDFKVISQTATSGKFYVNWED
SVAGGDYDQDVWGILSYTVTGNTVQVSTQVVSGSSANGQGFGYVISGTTKDGPHFHSGIY
NFKYTDPAPVTVTPSSAPTNTSGGCNLCNFGDPQTTVSYTASGSVASQFMDPLYYAAKWG
GFKDLNGSGTPDQVSEWDVRLSDGSGGSDGLPDNYFYATNPGALSSALERAFLSILQTSS
AASVATSSSSLTTGSTIYQARFNGTDWSGQLLAYAVDTNGVVTNPAQWDAGAKMKAVNAT
ARNILTYDGTSSANAGIPFRWGTLPASYQSTLNRSDTLGSARLNWIRGDQSNEGTATGKF
RVRPNSVLGDIVNSSPQYVGRPNAGYADADYATFVLGKKSRKPMLYVGANDGMLHAFSAN
PITSGSGSDAGTELFAYVPSALYGNLPGLSDLGYTHAYYVDGTPAVTDAKVNGNWKTVLV
GGLGGGGAGIYALDVTNPESISEGTAASTVLWEFTNNVDADLGYTFGQPSIIKMANGKWA
AIFGNGYNSAAGKAYLYVVFLDRPTGSKKWVLGTDYLKLATGAGSVSTPNGLSQPFPADV
DGDGTTDFIYAGDLLGNLWKFNMKSTTASAWGLQTANTPLFIATDANGTRQPITSSVDVT
RNPAGGYVVLFGTGRYVDTTDPANMSTQTFYGIWDQNTPTLSTVARSSLVAQTINREVDA
YGYTYRMVSQNQVLYAANGKQGWYLDLVSPASGIQGERVVYSPLARGDRIIFTTLIPSAN
SCDSGGTSWLMELASLSGGRLTVTPFDVNNDHTFSSADFLNDGANGNVPVGGRKSTVGIT
PAPTVTKCGTSKECKFMTGTTGNQETVGESASSQTGRLSWREILH
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcaagcccgcttccgccccgtcacaggcctccagttgttgctggccatcgcg
tcggccatcctcgccgtcgcatcggcatgcgccgcgcagctgagcttggcaacgcgcccc
ctctatgcagggggcaatgtgccgcccatggtgatgatcgacctgtccaaggaccatacg
ctgcatcagaaggcctacaacgactacaccgacctgaatggtgacggcgtgctcgacacg
acctataccaacagcatcgactacgccggctacttcgattcgtacaagtgctacacctac
gatggcagcacccagcatgccttcgtgccgtccgccgtcactgccgacaagtactgcaac
ggctccacctggagcggcaacttcctgaactgggcaagcatgagccgcatcgacgaagtg
cgcaagatcttgtacggcggtttccgctccacggataccgcgaccaccacggtgctcgaa
cgtgccttcctgccgatggacgcgcacgcatgggccaagttctacaacggctccgatgtc
agcaaactggttccgctgacggtggaagcggccgggcccacgctgacgtcgagcaccacg
gtcaccgtcgcggccaatgtcatcaccggcatcaaactcagctcggtcgcgaacatcagc
atcggcgaccagattgtcatgaccgccaactcacccgcgccggccaacacgaccctgacg
ggctgggtcatgagcgtggataccagcagcaacaagaccatcagccttgcggtttatcca
gatggggtttccaagcccagcggcgcggcaagcagctacaacagttgggcggtgaccaac
ctgacccgaggcgggctcactatctgcaacgtgacccccaaggattcaagcaacgtcaac
tcccagagcaatacgcaggcgccgcaattgcgggttgtctccggcaattacgccacttgg
ggcgccagcgagaaatggcaatgcaactggtcggaggagcaaaacaatacgcaaagctcc
ttcttgaccaaaatcaacggtacgagcgtgaccggctcatccaacggcaaccgggcagcc
ctttccggcatcaatgcgtcggcagagaatccggtgaaagcggcacgcgccctcggcact
ggcgaaagcagcggcaccttcaacgcacgcgtgcaagtctgcgtgccgggcctgctcggc
accgagaactgcaagcagtatggctcgtcttcctacaaacccttcggcctgctccagaaa
tacggtgaaagcggccagatgttgttcggactgatgaccggtacgtatgacaagaacatc
tcgggcggcgtattgcgccagaacgtggtgaatttctcccaggaggtcgatccgaccaat
ggcaccttcacgtacgcagcgagctctcccgtgaaaggtatcgtctggaatgtcaacaag
ctgcgcccatacggctacagctacagcgacggcagttacgtcaatgctgacagttgcaac
tatcagcagacctccatcgtacccagcggtggttccacatcgcaaaaccagccagctaac
gaaggcaactgctccacctggggcaatccgatctccgagatctacctggagtccttgcgc
tatttcgcaggaaagaccgcgaattccagctttacaccgaaaagcagcggcagcaaggat
gcggcgctgaatctgaccacgcccgcatgggcgaatccaatggacttgccgtccagcaac
gcgaacaaggcgccctactgcacgccgttgaacacgctggtgttcaactcaagcgtttct
tcgtacgacaacgatcaacttgccggcttcacggatctgaacacagccgacaccaacagc
acgtggaccgataaagtcggcgccggagagggcatcaatggcggtagctggttcatgggt
gggatcaatggcggcctgatcgacaatctctgttcgggcaagacaatctccaagctgagc
gacgtacttggcatctgccccgaaggtccttcgcagaagggaaccctccagatcgcaggt
gctgcgctctacgcgcacatgaaccggattcgctccaccagccaggcggcaacgctgggc
gtgccaaccgccgataccacctccctcaaggtcacgacctacgccgtccagctggccacc
aacacgcccaagatcaacgtgaatgtgggcggcaaaaccgtcaccatcatgcctgcgtac
cagttgcacccgcagtcgcccaactcggtaaccgcggacgccagcagcggaacactggtg
gacttcaaggtcatttcgcagacggccacgagcggcaagttctacgtaaactgggaagat
tccgtcgccggcggcgattatgaccaggatgtctggggcatcctcagctatacggtgacg
ggcaatacagtccaggtatcgacccaggtggtctctggctcgtcggcgaatggccagggc
tttggctatgtcatctccggcacaaccaaggatggcccacacttccattcgggcatctac
aacttcaagtacaccgacccggcacctgtcaccgtcacgccttcgagcgcgcccaccaac
acatcgggcggctgcaatctgtgtaacttcggcgatccccagaccaccgtcagctacacg
gccagcgggtcggtggcttcgcagttcatggatccgctctactacgcagcaaaatggggg
ggcttcaaggacctgaacggttcgggcacacccgaccaggtctccgagtgggatgtgcgc
ttgtccgatggcagcggcggctccgacggcttgccggacaactacttctacgccaccaac
ccaggcgcgctcagcagcgcgctggagcgcgcgttcctgtcgatcctgcagacttcttcg
gcggcatcggtggcgaccagttcctcgtcgctcacgaccggatcgacgatctaccaggct
cgcttcaatggcactgactggtccggtcaattgctcgcatacgctgtcgacaccaacggc
gtcgtcaccaaccctgcccagtgggatgcgggcgcaaaaatgaaggcggtcaacgcaacc
gctcgcaacatcctcacttacgatggcacgtcatcggcaaatgccgggattccgttccgt
tggggcaccctgccggcaagctatcagagcacgcttaaccgcagcgacacactaggaagc
gcacgcctgaactggattcgcggcgaccagagcaatgaagggactgcaaccggcaaattc
cgcgtccggcccaactcggtccttggcgacatcgtcaattccagtccacagtatgttggc
cgccccaatgcgggctacgcggacgccgactatgccaccttcgtcctgggcaagaaaagc
cgcaagcccatgctctatgtcggcgccaacgacggcatgctgcatgcgttctccgcgaat
ccgatcacgagcgggagcggcagtgacgccggtacggagttgtttgcctacgtgccttcc
gcgctatacggcaatctgcccgggctcagcgaccttggctacacgcacgcttactatgtc
gacggcacgcctgcggtgacggatgccaaggtcaatggcaactggaagactgtgctggtg
ggcgggctcggcggcggcggcgcgggcatctacgcattggatgtgaccaacccggagagc
atcagcgagggcacggccgcctcgaccgtcctgtgggagttcaccaacaacgtcgatgcg
gacctgggctataccttcgggcagccctcgatcatcaagatggcgaatggcaagtgggcg
gcgatcttcggcaacggctacaacagcgccgcaggcaaagcgtacttgtacgtcgtgttt
cttgacaggcccacaggctcgaagaagtgggtgctgggtaccgactatctgaagctggcc
acgggtgccggctcggtctccacgccgaacgggctttcgcaaccgttccccgctgacgtc
gacggcgatggcactaccgatttcatctacgccggcgacctgcttggcaacttgtggaag
ttcaacatgaagagcaccacggcttctgcctggggcctgcaaaccgcgaacacgccgctg
ttcatcgctaccgacgccaacggtacccggcagccgatcacatcgtccgtggatgtcacg
cgcaaccccgcgggcggctatgtcgtgctgttcggcacgggccgctatgtcgacaccact
gacccagcgaatatgtcgacgcagactttctacggcatctgggatcagaacacccccact
ttgagcacggtcgcccgcagttcgctggtagcgcagaccatcaaccgggaagtcgatgcc
tacggctacacttatcgcatggtgagccagaaccaggtcctctatgccgccaacggcaag
caaggctggtatcttgacctggtgtcgcccgcttccggcatccagggcgagcgggtggtc
tacagcccactggcgcgtggagaccgtatcatcttcacgacgctgattccgtcagcaaac
tcctgtgacagcgggggaaccagctggctgatggaactcgcatcgctatccggcgggcgc
ctgacggtcacaccattcgacgtaaacaacgatcacaccttctcttccgccgatttcctc
aacgacggcgccaatggcaacgtcccggttggcggacggaaatccaccgtcggcattaca
ccggcgcccacggtcacaaaatgcgggacgagcaaggaatgcaagttcatgaccggcacc
acgggcaaccaggagaccgtcggagagagcgcgtcgagccagacggggcggctgtcctgg
cgggagatcctgcattga
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