Cupriavidus basilensis: RR42_m3508
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Entry
RR42_m3508 CDS
T03642
Name
(GenBank) Poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cbw
Cupriavidus basilensis
Pathway
cbw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RR42_m3508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbw03019
]
RR42_m3508
Enzymes [BR:
cbw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RR42_m3508
Messenger RNA biogenesis [BR:
cbw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RR42_m3508
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
TruB_C
DUF2204
Motif
Other DBs
NCBI-ProteinID:
AJG20874
UniProt:
A0A0C4YFW6
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All DBs
Position
main:3731045..3732658
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AA seq
537 aa
AA seq
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MIKKLINRLLGKPGTQQRPVKRRGQRAHTPNIVAHAEHQIDQSLISRNAIKVTSTLQQAG
YEAFIVGGAVRDLLLGIKPKDFDVATNATPDQVQALFRRSRIIGRRFQIVHVTFYGGREQ
EIIEVSTFRALVDAVASETLPEGRRLKRSELDSKTHAIDASGRVLRDNVWGSQAEDAERR
DFTINAMYYDPAQQLVYDYHQGMEDIRARTLRMIGDPVTRYREDPIRMLRVVRFAAKTGF
TIDEDTRQPIADLASLIHNVPSARLFDEMLKLLMSGHAWASLQELRKAGLHRGLLPLLDV
ALEQPMGQRFVQLALDNTDQRVQVGKPVSPGFLFAALLWHHVLQRWTTLREQGEHAIAAL
NIAMDDVLERQTGQLAIQRRFVTDMRDIWGMQPRFEKRVGRMPFRLIESPRFRAGFDFLY
LRCESGEQPAELAKWWQDFQDADSHGREDLIEAVRPVRGAGRQGGGGSGGAGDADGFEPA
GDGDSGDSGGPARKKRRRRSPRKSDKVSPRSDMDASQESGSTADRKTGKVRVQPEES
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaaaagctaatcaaccggctgctaggcaagccgggcacccagcagcgccccgtc
aaacgccgcggccagcgcgcccatacgccgaatatcgttgcgcatgccgagcaccagatc
gaccagtcgctgatctcgcgcaacgccatcaaggtcacctccacgctgcagcaggcaggc
tacgaggcgtttatcgtcggcggcgcggtacgcgacctgttgctgggcatcaagcccaag
gacttcgacgtcgccaccaacgccacgcctgaccaggtgcaggcgctgttccgccgctcg
cgcatcatcggccggcgcttccagatcgtgcacgtgacgttctatggcgggcgcgagcag
gaaatcattgaggtctccaccttccgcgcgctggtcgacgcggtcgccagcgagaccttg
cccgaagggcgccgcctcaagcgctccgagctcgacagcaagacccacgcgatcgatgcc
tctggccgcgtgctgcgtgacaacgtgtggggctcgcaggccgaagacgcggaacgccgc
gacttcaccatcaacgcgatgtactacgaccccgcccagcaactggtgtacgactaccac
cagggcatggaggacatccgcgcgcgcacgctgcgcatgatcggcgatccggtcacacgc
taccgcgaagaccctatccgcatgctgcgcgtggtgcgcttcgccgccaagaccgggttc
acgatcgacgaggacacccgccagccgatcgccgacctggcctcgctgatccacaatgtg
cccagcgcgcgcctgttcgacgagatgctcaagctgctgatgtcgggccatgcctgggcg
tcgctgcaggagctgcgcaaggccggcctgcaccggggcctgctgccactgctggatgtc
gcgctggagcagccgatgggccagcgcttcgtgcaactagcgctggacaacacggaccag
cgcgtgcaggttggcaaaccggtctcgccgggcttcctgtttgccgcgctgctatggcac
cacgtgctgcagcgctggaccacgctgcgcgagcaaggcgaacatgccatcgccgcgctc
aatatcgccatggacgacgtgctggagcgccagaccggccagctcgccatccagcgccgc
tttgtcaccgacatgcgggacatctggggcatgcagccgcgcttcgagaagcgcgtgggc
cgcatgccgttccgcctgatcgaatcgccgcgctttcgcgccggcttcgatttcctctac
ctgcgctgcgaatccggcgagcaaccggccgaactggcgaaatggtggcaagacttccag
gatgccgatagccacggccgcgaggacctgatcgaggccgtgcgcccggtgcgcggcgcc
ggcaggcaaggcggtggcggcagcggcggcgcgggcgatgccgacggctttgagcccgcc
ggagatggcgacagcggcgatagcggcggcccggcacgcaagaagcgccgtcggcgcagt
ccgcggaaatcggataaagtttctccgcggagtgatatggacgcgagccaggaatccggc
tccactgcagaccggaaaaccggcaaggtacgcgtccagccggaggaatcgtaa
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