Cupriavidus basilensis: RR42_m3593
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Entry
RR42_m3593 CDS
T03642
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cbw
Cupriavidus basilensis
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbw03016
]
RR42_m3593
Enzymes [BR:
cbw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
RR42_m3593
Transfer RNA biogenesis [BR:
cbw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RR42_m3593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AJG20959
UniProt:
A0A0C4YG45
LinkDB
All DBs
Position
main:complement(3819844..3822000)
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AA seq
718 aa
AA seq
DB search
MQLLFEEGGEIRAGTVLTQQGESYQVELPAGKRTKVKSRDVLLQFAQPSAIELLRQTADL
VGEVDLEFLWECASEDEFGFVDLAAEYYGAGASVVQQAALAQTLHGNPVYFRRKGRGRYQ
RAPEDQLKAALAALERKKQQALVQAEYENQLKALTLPDAFRGKALQLLFKPDKNSLEYKA
MDAACTALGMSPMRLMVAVGGIASPRALHEAKFLSECFPKGTGFPEVAVPEPAGELPRAD
VEAFSIDDVTTTEIDDALSVTPLDGGKIRVGIHIAAPGLGIRRGEPLDAVARHRLSTVYF
PGDKITMLPDSVVERYTLQEGRECPALSLYVVYDPALQMIVSSETRAELVKIAANLRHNL
LEDVVTEAALAAGTGDYPFRDALTQLFHFSGWLHDERQKARLASGLRPESHNRADYSFYI
DLLEDGGERVRIEQRRRGSPLDKIVAELMILANSTWGKLLADNGVPGIYRTQKAWGMNRT
RMQTYPAPHEGLGVAQYAWSTSPLRRYVDLVNQWQILAVAQHGITAKLVAPFKPKDSDLL
AAVADFEGTYAAYADHQSTMERYWCLRWLQQEKRERLMGSVLKEGAVRFAEIPLVTRVPE
LMQASRGTQVLLEIGAIDEISLEVSCRVLEVFAGEGELPQEEMERDDEAGEVSAQAAAEA
AAEEAAEAAAEGVTEGATEGEVDAAAGEAGDDEAASAADATSEGAASDTRDTGTGGAG
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgctgttcgaagaaggcggcgagattcgcgccggcaccgtgctgacccagcag
ggcgagtcgtaccaggtggagctgcccgcgggcaagcgcaccaaggtcaagtcgcgcgac
gtattgctgcagttcgcgcagccgtcggcgatcgagctgttgcgccagaccgccgacctg
gtcggcgaggtcgacctggaattcctgtgggaatgtgcgtcggaggacgagttcggcttt
gtcgacctggcggccgagtactacggcgcgggtgcgagcgtggtgcagcaagccgcgctg
gcgcagacgctgcacggcaacccggtctatttccgccgcaagggccgcgggcgctaccag
cgcgcgccggaagaccagttgaaggctgcgctcgccgcgctcgagcgcaagaagcagcaa
gccctggtgcaggctgagtacgaaaaccagctcaaggccctgaccctgcccgacgcgttc
cgcggcaaggcactgcaactgctgttcaagcccgacaagaacagcctcgaatacaaggcg
atggacgccgcttgcaccgcgctaggcatgtcgccgatgcggctgatggtggcggtgggc
ggcattgccagcccgcgcgcgctgcatgaggccaagttcctctccgaatgcttccccaag
ggcaccggctttcccgaggtggccgtgccggaacccgccggcgaactgccgcgcgcggat
gtggaggcgttctccatcgatgatgtcaccaccacggagatcgacgatgcgctgtcggtc
acgccgctggatggcggcaagatccgcgtgggcatccatatcgcggcgcccggcctgggc
atccgccgtggcgagccgctcgacgccgtggcgcgccatcgcctgtcgacagtctatttc
cccggcgacaagatcaccatgctgccggattcggtggtggagcgctacacgttgcaggaa
gggcgcgaatgcccggccctgtcgctgtatgtggtctacgacccggccctgcagatgatc
gtcagcagcgagacccgcgccgagctggtcaagatcgcggccaacctgcgccacaacctg
ctcgaggatgtggtgaccgaggccgcgctggccgccggcaccggcgactacccgttccgc
gacgcgctgacccagttgttccatttctccggctggctgcacgacgaacgccagaaggcg
cgtctggccagcgggctgcgtcccgagtcgcacaaccgcgccgactacagcttctacatc
gacctgctggaagatggcggcgaacgcgtacgcatcgagcagcgccgccgcggctccccg
ctcgacaagatcgttgccgagctgatgatcctggccaacagcacctggggcaagctgctt
gccgacaacggtgtgccgggcatctaccgcacgcagaaggcctggggcatgaaccgcacg
cgcatgcagacctacccagcgccccacgaggggctgggcgtggcgcaatatgcgtggagc
acctcgccgctgcgccgctatgtcgacctggtcaaccaatggcagatcctggcagtcgcc
cagcatggcatcacggcaaagctggtggcgccgttcaagcccaaggattcggacctgctg
gccgcggtggcggatttcgaaggcacctacgccgcctatgccgaccaccagtcgaccatg
gagcgctactggtgcctgcgctggctgcagcaggaaaagcgcgagcgcctgatgggctcg
gtgctcaaggaaggcgcggtgcgctttgccgagatcccgctggtcacgcgcgtgccggag
ttgatgcaggcgtcgcgcggcacacaggtgctgctggagatcggcgcgatcgacgagatc
tcgctggaagtgtcatgccgggtcctggaggtgtttgccggcgaaggcgagctgccgcag
gaggagatggagcgggacgacgaagctggcgaagtgtcggcgcaagccgccgctgaagcc
gcggccgaggaagctgccgaagccgccgccgagggtgtgaccgaaggggcaaccgaaggt
gaggttgacgctgcggctggggaagccggcgatgacgaagccgcgagtgccgcggatgcc
acaagcgaaggcgccgcgtcggacacacgcgacaccggtaccggcggcgcgggctga
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