KEGG   Cupriavidus basilensis: RR42_m3640
Entry
RR42_m3640        CDS       T03642                                 
Name
(GenBank) Signal recognition particle, subunit Ffh SRP54
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
cbw  Cupriavidus basilensis
Pathway
cbw02024  Quorum sensing
cbw03060  Protein export
cbw03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cbw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    RR42_m3640
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RR42_m3640
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RR42_m3640
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cbw02044]
    RR42_m3640
Enzymes [BR:cbw01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     RR42_m3640
Secretion system [BR:cbw02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   RR42_m3640
  Eukaryotic Sec-SRP protein
   RR42_m3640
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA Zeta_toxin AAA_16 T2SSE AAA_31 YqeC AAA_30 AAA_33 AAA_14 AAA_19 Thymidylate_kin nSTAND3 Helicase_RecD ATP_bind_1 APS_kinase ArsA_ATPase Rad17 KTI12 TsaE AAA LPD22
Other DBs
NCBI-ProteinID: AJG21006
UniProt: A0A0C4YK18
LinkDB
Position
main:3872385..3873779
AA seq 464 aa
MLDNLTQRLARVVKTMRGEARLTEANTAEMLREVRLAMLEADVALPVVREFIARVKEKAL
GEDVVSSLTPGQALVGVVQRELTAVIGGEESLSADNKSGELNLAVQPPAIILMAGLQGAG
KTTTVGKLAKWLKENKKKKVLTVSCDVYRPAAIAQLKTVSEQVGADFFPSEPDQKPVDIA
RAAVDWARKHYHDVLIVDTAGRLGIDEAMMQEIAALHAEIKPVETLFVVDAMLGQDAVNT
ARAFNDALPLTGVVLTKLDGDARGGAALSVRHITGRPIKFVGVGEKLDGLEPFYPDRMAQ
RILGMGDILALVEEAQRGVDMEAAEKLAKKIKKTGDFDLEDFKAQIGQMKKMGGLGSLVD
KLPAQFAQQAQGANMDVAEKQVRRMEGIINSMTAAERAKPDLIKASRKRRIATGAGVPVQ
EVNRLLNQFDQMQSMMKKLKGGGMMKMMRSMGAMKGGMKGLFNR
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgctggacaatctcactcaacgcctggcgcgggtcgtcaagaccatgcgcggcgaggct
cgcctgaccgaagccaataccgccgaaatgctgcgcgaagtgcgcctggccatgctggag
gccgatgtcgccttgccggtggtgcgggaattcatcgcccgcgtgaaggaaaaggcactt
ggcgaagacgtggtgtccagcctgacgccgggccaagcgctggtgggcgtggtgcagcgc
gagctgaccgctgtcatcggcggcgaggaaagcctgtccgccgacaacaagagcggcgag
ttgaacctggcggtgcagccgcccgcgatcatcctgatggccggcctgcagggcgccggc
aagaccactaccgtcggcaagctggccaagtggctgaaagaaaacaagaagaagaaggtg
ctgacggtctcgtgcgacgtctaccgccccgccgctatcgcccagctcaagaccgtatcc
gagcaggtcggcgccgatttcttcccctccgagcccgaccagaaaccggtggacatcgcg
cgcgcggcggtggactgggcccgcaagcattatcacgacgtgctgatcgtcgatacggca
ggccgcctgggtatcgacgaagccatgatgcaggaaatcgccgcgctgcacgccgagatc
aagccggtagaaaccctgttcgtggtcgacgccatgctgggccaggacgcggtcaacacg
gcccgcgccttcaatgacgccctgcccctgaccggcgtggtgctgaccaagctggacggc
gacgcgcgcggcggtgccgcgctgtcggtgcgccacatcaccgggcgcccgatcaagttc
gtcggcgtcggagaaaagctggacggcctcgagcccttctaccccgatcgcatggcccag
cggatcctgggcatgggcgacatcctcgcgctggtcgaggaagcccagcgcggcgtggac
atggaagcggccgagaagctggccaagaagatcaagaagacgggcgacttcgacctggaa
gacttcaaggcgcagatcggccagatgaagaagatgggcggcctgggcagcctggtcgac
aagctgccggctcagtttgcccagcaggcgcagggcgccaacatggacgtggcggaaaag
caggtgcgccgcatggaaggcatcatcaacagcatgacggccgccgagcgcgccaagccc
gacctgatcaaggccagccgcaagcgccgcatcgccaccggcgccggcgtgccggtgcag
gaagtcaaccgcctgctcaaccagttcgaccagatgcagagcatgatgaaaaagctcaag
ggcggcggcatgatgaagatgatgcgctcgatgggcgcgatgaagggcggcatgaaggga
ctcttcaaccgctga

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