Cupriavidus basilensis: RR42_m3868
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Entry
RR42_m3868 CDS
T03642
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cbw
Cupriavidus basilensis
Pathway
cbw00300
Lysine biosynthesis
cbw00470
D-Amino acid metabolism
cbw01100
Metabolic pathways
cbw01110
Biosynthesis of secondary metabolites
cbw01120
Microbial metabolism in diverse environments
cbw01230
Biosynthesis of amino acids
Module
cbw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RR42_m3868
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RR42_m3868
Enzymes [BR:
cbw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RR42_m3868
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Porin_O_P
Motif
Other DBs
NCBI-ProteinID:
AJG21227
UniProt:
A0A0C4Y757
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All DBs
Position
main:4127618..4128886
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AA seq
422 aa
AA seq
DB search
MTAFFHRHDGALSVEHVPLARIAAEYGTPTYVYSRAALTAAYQAYAAACQGRRARVQYAM
KANSNLAILQVFARLGAGFDIVSGGELQRVLAVGGDPRKVVFSGVGKTAAEMELALQHDV
LSFNVESIPELDRLNAVAGRLGKRARVSLRINPDVDAKTHPYISTGLKGNKFGVAFEDVL
PTYRAAAALPHLEVAGIDCHIGSQITEVAPYLEALDKVLDVVEALEREGINLEHIDVGGG
LGITYDDETPPDITGFARTLLDRVAERGHGHREVLFEPGRSLVGNAGVLLTQVEFLKPGA
AKNFCIVDAAMNDLARPAMYEAYHRIEPVQLREAAQATALTYDVVGPVCESGDWLGRDRA
LAVQPGDLLAVMSAGAYGFVMSSNYNTRPRAAEVMVDGDDVHLVRGREHVADLFRDERLL
QG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccttcttccatcgccacgacggcgccctgagcgtcgagcacgtgccgctcgcg
cgcattgccgccgaatacggcacccctacctacgtctactcgcgcgccgctctgaccgcc
gcctaccaagcctacgccgctgcgtgccaggggcgccgcgcgcgtgtgcagtacgccatg
aaggccaattcgaacctggcgatcctgcaggtcttcgccaggctcggcgcgggcttcgat
atcgtgtctggcggcgagctgcagcgcgtgctggcagtgggcggcgatccgcgcaaggta
gtgttctcgggcgtgggcaagaccgccgccgagatggaactggcgctccagcatgatgtg
ctgtcgttcaatgtcgagtcgatccccgagctggaccgcctcaatgccgtggccggccgc
ctgggcaagcgcgcgcgcgtgtcgctgcgcatcaacccggatgtggacgccaagacccac
ccgtatatctccaccggcctgaagggcaacaagttcggcgtcgcctttgaggacgtgctg
ccgacctaccgcgccgccgccgcgctgccgcacctggaagtcgcgggcatcgactgccat
atcggctcgcagatcaccgaggtcgccccttatctggaagcgctggacaaggtgctggac
gtggtggaagcgctggaacgcgaaggcatcaatcttgagcatatcgacgtaggcggtgga
ctgggcatcacttacgacgacgagaccccgccggacatcaccggctttgcccgcacgctg
ctggaccgcgtggcagagcgtggccatggccatcgcgaggtgctgttcgagccgggccgc
tcgctggtgggcaatgccggcgtgctgctgacccaggtcgagttcctcaagccgggcgcc
gccaagaacttctgcatcgttgacgcggccatgaacgacctggcccgccctgccatgtac
gaggcctaccaccgcatcgagcccgtgcaactgcgcgaagccgcgcaggccaccgccctg
acctacgacgtggtcggcccggtgtgcgaatccggcgactggctcggccgcgaccgcgcc
ctggcggtgcagccgggcgacctgctggccgtgatgtcggccggcgcctatggctttgtc
atgagctccaactacaacacccgcccgcgcgctgccgaagtcatggttgacggcgacgac
gtgcatctggtgcgcggccgcgagcacgtggctgacctgttccgcgacgaacgcctgctg
caaggctag
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