Cupriavidus basilensis: RR42_m3924
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Entry
RR42_m3924 CDS
T03642
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cbw
Cupriavidus basilensis
Pathway
cbw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RR42_m3924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbw03021
]
RR42_m3924
03400 DNA repair and recombination proteins [BR:
cbw03400
]
RR42_m3924
Enzymes [BR:
cbw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RR42_m3924
Transcription machinery [BR:
cbw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RR42_m3924
DNA repair and recombination proteins [BR:
cbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RR42_m3924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
Baculo_ME53
Motif
Other DBs
NCBI-ProteinID:
AJG21283
UniProt:
A0A0C4YEM8
LinkDB
All DBs
Position
main:complement(4171178..4175422)
Genome browser
AA seq
1414 aa
AA seq
DB search
MKALLDLFKQVQQEEQFDAIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELAAPTAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAFVVLEPGMTPLKKSQIMSEDDYIAKCEEYGEGEFVAM
MGAEGIRELLRGIDIEKQIETIRAELQTTGSEAKIKKFAKRLKVLEAFQRSGIKPEWMIL
EVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRML
QEAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGP
TLKLHQCGLPKLMALELFKPFIFHKLETMGIATTIKAAKKEVESQTAVVWDILEEVIREH
PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQME
ARTLMLASNNVLFPANGDPSIVPSQDVVLGLYYTTRDKINGKGEGLTFADISEVIRAYEN
KEVELASRVNVRITEYELVDKDAVGDARFAPKITLQATTVGRAIMSEILPKGLPFSVLNK
PLKKKEISRLINTAFRKCGLRETVIFADKLLQSGFRLATRAGISIAIDDMLVPPQKEKII
SDAAAKVKEYDKQYMSGLVTDQERYNNVVDIWGAAGDQVGKAMMEQLQHEDVVDRHGNTV
KQDSFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFI
STHGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTTNGVAMKALVEGGEVIEA
LRDRILGRVTVSDVVNPETQETAIEAGTLLDEDLVDMIDAIGVDEVKVRTPLSCDTRYGL
CGMCYGRDLGRGVLVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRSAVASSVEAKA
TGTVRFTATMRYVTNAKGELIVISRSGEALITDDHGRERERHKIPYGATLLVQDGQAIKA
GTQLATWDALTRPIVSEYTGTTKFENVEEGVTVAKQMDEVTGLSTLVVIDAKRRTAATKG
LRPQVKLLDANGQEVKIPGTDHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRD
ITGGLPRVAELFEARSPKDAAVLAEVTGTTSFGKDTKGKQRLVITDLDGNAHEFLITKEK
QVLVHDGQVVNKGEMIVEGPADPHDILRLKGIEELAHYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQIADVGDTKFIPGEQVERSELLDENDRVIAEGKRPATYENLLLGITKASL
STDSFISAASFQETTRVLTEAAIMGKTDDLRGLKENVIVGRLIPAGTGLAYHRARKAREA
AERERAQAISDEEQSLFIEPPVVPATTEGEGDAV
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcattgctcgatctctttaagcaggttcagcaggaagagcagttcgacgcgatc
aagatcggcctggcatcgccagagaagatccgttcgtggtcgtacggtgaagtgaagaag
ccggaaaccatcaactatcggacgttcaagcccgagcgcgatggtctgttctgcgccaag
atctttggcccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcat
cgcggcgtgatctgcgagaagtgcggcgttgaagtgacgctggccaaggtgcgccgcgag
cgcatgggccacatcgaactggctgcgccgaccgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgatatcgaacgcgtcctgtac
ttcgaagcattcgtggtgctcgaacccggcatgaccccgctcaagaagagccagatcatg
tccgaggacgactacatcgccaagtgcgaagagtatggcgaaggcgagttcgtggccatg
atgggtgccgaaggcatccgtgaattgctgcgcggcatcgacatcgaaaagcagatcgaa
acgatccgcgccgagctgcagaccaccggctccgaagccaagatcaagaagttcgccaag
cgcctgaaggtgctcgaggcgttccagcgttcgggcatcaagccggaatggatgatcctg
gaagtgctgccggtgctgccgcccgaactgcgtccgctggttccgctggatggtggccgt
ttcgccacctcggacctgaacgacctgtatcgccgcgtcatcaaccgtaacaaccgcctg
aagcgcctgctcgaactgaaggcgcctgaaatcatcgtgcgcaacgaaaagcgcatgctg
caggaagcggttgactcgctgctggacaacggtcgtcgcggcaaggccatgacgggcgcc
aacaagcgtccgctgaagtcgctggccgaaatgatcaagggcaagggcggccgtttccgt
cagaacttgctgggcaagcgcgtcgactactccggccgttcggtcattgtggtgggcccg
accctgaagctgcatcagtgcggcctgcccaagctgatggcgctcgagctgttcaagcct
ttcattttccacaagctggaaacgatgggcatcgccaccaccatcaaggcggcgaagaag
gaagtggaaagccagaccgctgtggtgtgggacatcctcgaagaggtgatccgcgagcat
ccggtcatgctgaaccgcgcgccgacgctgcaccgcctgggcatccaggcgttcgagccg
gtgctgatcgaaggcaaggccatccagctgcacccgctggtctgcgcggcgttcaacgcc
gacttcgacggtgaccagatggctgttcacgtcccgctgtcgctggaagcgcagatggaa
gcccgcacgctgatgctggcctccaacaacgtgctgttcccggccaacggcgatccgtcg
atcgtcccgtcgcaagacgtggtgctgggtctgtactacacgacccgcgacaagatcaac
ggcaagggcgaaggcctgacgtttgccgacatcagcgaagtgatccgcgcctacgagaac
aaggaagtcgaactggcttcgcgcgtgaacgtgcgtatcaccgagtatgaactggtcgac
aaggatgcagtgggcgacgcccgcttcgcgcccaagatcacgctgcaggccaccacggtc
ggccgcgcgatcatgtccgagatcctgccgaagggcctgcctttctcggtgctgaacaag
ccgctgaagaagaaggaaatctcgcgcctgatcaacaccgcgttccgtaagtgcggcctg
cgcgagaccgtgatcttcgctgacaagctgctgcagtcgggcttccgcctggcaacgcgc
gctggtatctcgatcgccatcgacgacatgctggtgccgccgcaaaaggaaaagatcatt
tccgacgcggcagccaaggtgaaggaatacgacaagcagtacatgtcgggtctggtgacc
gaccaggaacgctacaacaacgtcgtggacatctggggcgccgccggcgaccaggtgggc
aaggcgatgatggagcagctccagcacgaagacgtggtcgaccgtcacggcaacaccgtg
aagcaagactccttcaactcgatttacatgatggctgactcgggcgcgcgcggttccgct
gcgcagatccgtcagctggctggcatgcgtggcctgatggccaagccggatggctcgatc
attgaaacgccgattacggcgaacttccgtgaaggcctgaacgttctgcagtacttcatc
tccacccacggtgcgcgtaagggcctggcggatacggcactgaagaccgcgaactcgggt
tacctgacccgtcgtctggtcgacgtgacgcaggatctggtggtggtggaagacgattgc
ggcacgaccaacggcgtggccatgaaggccctggttgaaggcggtgaagtgatcgaagcg
ctgcgcgaccggattctcggccgtgtgacggtgtccgacgtggtgaaccctgagacccag
gaaaccgcgatcgaggccggcaccctgctggacgaagacctggtcgacatgatcgacgcc
atcggcgtggacgaagtgaaggtgcgcacgccgctgtcgtgcgacacgcgctacggcctg
tgcggcatgtgctatggccgcgaccttggccgcggcgtgctggtgaactccggcgaagcg
gttggcgtgatcgccgctcagtcgattggcgagccgggcacccagctgaccatgcgtacg
ttccacatcggcggcgcggcatcgcgttcggccgtggcatcgagcgtggaagcgaaggca
accggtaccgtgcgtttcacggcgaccatgcgttacgttaccaatgcgaagggcgagctg
atcgtcatctcgcgttcgggtgaagcgctgatcaccgacgaccacggccgcgagcgcgag
cgccacaagatcccgtacggcgccacgctgctggtgcaggacggccaggccatcaaggct
ggcacgcagctggccacgtgggacgcgctgacgcgcccgatcgtgtcggagtacaccggc
acgaccaagttcgagaacgtcgaagaaggcgtgaccgtcgccaagcagatggacgaggtc
accggcctgtcgaccctcgtggtgattgatgcaaagcgccgtacggctgccaccaagggc
ctgcgcccgcaggtgaagctgctcgacgccaacggccaggaagtgaagatcccgggcacg
gaccactccgtgaccatcggcttccaggtcggcgcgctgatcaccgtgaaggacggccag
caggtgcacgtgggcgaagtgcttgcacgtatcccgaccgaatcgcaaaagacccgcgac
attaccgggggtctgccgcgtgtggccgagctgttcgaagcgcgttcgccgaaggatgcc
gccgtgctggcggaagtgaccggcaccacgtcgttcggcaaggacaccaagggcaagcaa
cgcctggtgattacggacctggacggcaacgcccatgagttcctgatcaccaaggaaaag
caagtcctggtgcacgatggccaggtggtgaacaagggcgaaatgatcgtggaaggtccg
gcggacccgcacgacatcctgcgcctgaagggcatcgaggagctggcgcactacatcgtc
gacgaagtgcaggacgtgtaccgtctgcagggcgtgaagatcaacgacaagcacatcgaa
gtgatcgtgcgccagatgctgcgccgcgtgcagatcgcggatgtgggcgacaccaagttc
atcccgggtgaacaggtggagcgttcggaactgcttgacgagaacgatcgcgtgatcgcc
gaaggcaagcgtccggccacgtacgaaaacctgctgctcggtatcaccaaggcgtcgctg
tcgaccgacagcttcatctcggcggcatcgttccaggaaaccacccgcgtgctgacggaa
gccgcgatcatgggcaagaccgacgacctgcgtggtctgaaggaaaacgtgatcgttggc
cgactgatccccgctggtacgggtctggcctaccaccgtgctcgcaaggcgcgcgaggcg
gccgagcgcgaacgtgcccaggcgatctccgacgaagagcagtcgctcttcatcgagccg
cctgtggtgccggcgacgaccgaaggcgagggcgacgcggtctaa
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integrated database retrieval system
