Cupriavidus basilensis: RR42_m4099
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Entry
RR42_m4099 CDS
T03642
Name
(GenBank) Helicase PriA essential for oriC/DnaA-independent DNA replication
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cbw
Cupriavidus basilensis
Pathway
cbw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RR42_m4099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbw03400
]
RR42_m4099
Enzymes [BR:
cbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RR42_m4099
DNA repair and recombination proteins [BR:
cbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RR42_m4099
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
Zn_ribbon_6
AAA_19
ADDB_N
SLFN-g3_helicase
Bac_DnaA
HypA
DUF3797
DUF5817
Motif
Other DBs
NCBI-ProteinID:
AJG21447
UniProt:
A0A0C4Y7N7
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All DBs
Position
main:complement(4353497..4355800)
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AA seq
767 aa
AA seq
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MLPAIPGQAGPAAELIDGAPLAVVRVALDTPADDVFDYLAGPEVQPGELVTVPFGRRTLV
GVAISRCTHSDVPADKLRSVAQRLDWLPPLGAHWIALAGFAARYYHRCLGEVMLPALPPA
LREADGWARLALRARSEHYRAAPGQGEALLAAVPPRARTVLALAQALVAAAGEGRAVSAA
EARVLCSAAPSRLAEWTEAGWVISGRADQPLLGAPSAAEPSTAPPLHEEQRVAVEAIAQA
KGFAPFLLHGVTGSGKTEVYLHAMADVLARDAQAQVLMLVPEINLTPQLQGRIASRFPHL
PLAVLHSGLADQERTLQWLAAHRGEARIVLGTRLAVLASLPHLALIVVDEEHDTSYKQQE
GLRYSARDLAVWRAKQLGAAVVLGSATPSMESWWRAEQGTYRKLVLRERAQTDATLPTVR
LIDINQERQRQRALYEGLSVPLLNAIEARLQRGEQSLLFLNRRGYAPVLACDSCGWLSGC
PRCSAYMVLHRPERRLRCHHCGLESPVPHHCPDCGNVDVAPLGRGTQRIEEALAARFPQA
RIARIDADSTRRKGSAQAMFDEVHAGEVDILVGTQMVAKGHDFQRVTLVGIVHPDAAMFS
HDFRAAEHLFASLMQVAGRAGRAGLAGEVLIQTRYPDASALQALVRHDYDGFAATQLRER
RQAGLPPFAYQVLVTADHAELERALAFLQSARNRADTCRMAPEVQLHDPVPMSMVRVANR
ERAQMLVESTSRIALQRFISEWVQTFGEALGDAKGVRWQLEIDPLRI
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgttaccggcgatccccgggcaagccgggccggccgcggagctcatcgacggcgcaccg
cttgccgtcgtgcgggtggcacttgatacgccggctgacgatgtcttcgattaccttgct
ggcccggaagtccagcccggcgaactggtcacggtgccgttcggccgccgtacgctggtc
ggcgtggcgatatcgcgttgtacgcactccgatgtacctgcggacaagctgcgttctgtc
gcgcagcgcctggactggctgccaccgcttggcgcccactggattgcgctggcgggcttt
gccgctcgctattaccaccgctgccttggcgaagtcatgctgcccgcgctacctccggcc
ctgcgcgaggccgacggctgggcgcggctggcactgcgtgcccgcagcgaacactaccgc
gcggccccggggcagggcgaggcgctgttggcggcggtgccgccgcgcgcccgcaccgtg
ctggcgctggctcaagcgctggtggcagccgccggggaagggcgggcggtatccgccgcc
gaggcgcgcgtgctatgcagcgcggcgccctcgcgcctggcggagtggaccgaggccggc
tgggtgatctccgggcgggccgaccagcccttgctgggcgcgccctcggctgccgagccg
tcgaccgcgccgccactgcacgaggagcagcgcgtggccgtggaagccatcgcgcaggcc
aagggattcgcgccgttcctgctccacggcgtcaccggcagcggcaagaccgaagtctac
ctgcacgccatggccgacgtgctggcgcgcgatgcgcaggcgcaggtgctgatgctggtg
cctgaaatcaacctcacgccgcaactgcagggccgcattgcctcgcgctttccccatctg
ccgctggcggtgctgcatagcggcctggccgaccaggagcgcacgctgcaatggctggcc
gcgcatcgcggcgaggcccgcatcgtgctgggcacgcggctggccgtgctggcctcgctg
ccacacctggcgctgatcgtggtcgacgaggagcacgacacatcctacaagcagcaggaa
ggcctgcgctactccgcgcgcgacctggccgtatggcgggccaagcagctcggcgcggct
gtggtgctgggctccgccacgccgtccatggagtcctggtggcgtgcggagcagggcacc
taccgcaagctggtgttgcgtgagcgggcccagaccgatgccacgctgcccacggtgcgg
ctgatcgatatcaaccaggaacgccagcgccagcgtgccctctacgaagggctgtcggtg
ccgttgctcaacgccatcgaggcccgcctgcagcgtggcgagcagagcctgctgttcctg
aaccggcgcggctacgccccggtgctggcctgcgatagctgcggctggctctccggatgc
ccgcgctgctcggcctatatggtgctgcaccggccggagcgccgcctgcgctgccaccat
tgcgggctggaatccccggtgccgcaccattgcccggattgtggaaatgtggatgttgca
ccgcttggccgaggcacccagcgcatcgaggaggccttggcagcacgcttcccgcaagcg
cgcatcgcccgcatcgatgccgactccacgcgccgcaagggcagcgcgcaggccatgttc
gatgaggtccacgcaggcgaggtcgacatcctggtcggtacgcagatggtggccaaggga
cacgacttccaacgcgtgaccctggtcggcatcgtccatccggacgccgccatgttcagc
cacgactttcgcgcggccgagcatctgtttgcctccctgatgcaggtggccggacgggcc
gggcgggcagggctggcgggcgaggtgctgatccagacccgctatcccgatgcatcggca
ttgcaggcattggtacgccatgactatgatggattcgcggctacccagttgcgcgagcgc
cgccaggccgggttgcccccgtttgcctaccaggtgctcgtcacggccgaccatgccgaa
ctggagcgtgcgctggccttcctccagagcgcgcggaatcgggccgatacgtgccggatg
gcgccggaggtgcaactccatgacccggtgccgatgtcgatggtgcgggtggctaaccgg
gagcgcgcgcaaatgctggtggaaagtacctcgcgcattgcactgcaaagatttatcagc
gagtgggtgcaaactttcggcgaggcgctgggcgatgccaagggcgtgcgctggcagttg
gagatcgatcctttgcgtatctga
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