Cupriavidus basilensis: RR42_s0139
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Entry
RR42_s0139 CDS
T03642
Name
(GenBank) ADA regulatory protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cbw
Cupriavidus basilensis
Pathway
cbw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RR42_s0139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbw03000
]
RR42_s0139
03400 DNA repair and recombination proteins [BR:
cbw03400
]
RR42_s0139
Enzymes [BR:
cbw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RR42_s0139
Transcription factors [BR:
cbw03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RR42_s0139
DNA repair and recombination proteins [BR:
cbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RR42_s0139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AJG21737
UniProt:
A0A0C4Y8J8
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All DBs
Position
secondary:151240..152808
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AA seq
522 aa
AA seq
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MLAMKLDPDTCYKAVASHDRRFDGRFFVGVSSTGVYCRPICAVRTPKRENCTFYDSAAAA
EKQGFRPCLRCRPELAPGHGLADLSGRLAQAAATLIDEGFMVDAGVAGLAARIGITERHL
RRLFDAQFGVSVLEYAQTQRLLLAKRLLTDTGLTVTDVAHAAGFGSVRRFNDVLKTRYGL
TPMAMRKRAADNVADELVFELGYRPPMAWAAFLQFLGVRAVDGIEQLGDGTYARTLAIDS
GGRTHVGWLRLEHVARRHVIRVTLSGSLAHVIPQALGRVRRLCDLGCRPDVVDQHLGPLA
AEAPGMRLPGAVDGFEIAVRAVVGQVISVKHARTLLARLAERHGLPLAQPMPALRVTFPG
AATLAGVPPEALREIGIPLGKGRAIHAIAARVAAGALKLEPDAAPEDTMARLREVEGVGD
WTAQYVAMRALGWPDAFPGTDYVLRKVLGIATVRGMNQHVAQWAPWRAYAAVHLWRRYEE
HKPDKPDKPDKSDKSDKSDKSDKSVRGDKTRDTTSDTTRNTP
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgctggctatgaaactcgatccggatacctgctacaaggccgtggcttcgcacgaccgc
cgcttcgacgggcgcttcttcgtgggcgtgtcgtccactggcgtctactgccggccgatc
tgcgcggtgcgcacgcccaagcgcgagaactgcacgttctacgacagtgctgccgcggcc
gagaagcagggtttccggccctgcctgcgctgccggcccgagctggcgccgggacacggg
ctggccgacctgtcggggcgcctggcccaggccgcggccacgctgatcgacgagggcttc
atggtggatgccggcgtggccgggctggcggcgcgcatcggcattaccgagcgccacctg
cgccggctgttcgatgcgcagttcggcgtctcggtgctggagtatgcgcagacgcagagg
ttgctgctggccaagcgtttgctgaccgatacggggctgaccgtgaccgacgtggcgcat
gccgctggctttggcagcgtgcggcgctttaacgatgtgctcaagacgcgctacgggctg
acgcccatggccatgcgcaagcgcgccgccgacaatgtggccgacgagctggtgttcgag
ctgggctaccgcccgccgatggcgtgggccgcgttcctgcagttcctgggcgtgcgcgcg
gtggatggcatcgagcagcttggcgatggcacctacgcgcgcacgctggcgatcgacagc
ggcggccgcacgcatgtgggctggctgcggttggagcacgtcgcgcgccgtcatgtgatc
agggtgacgttgtccggttcgctggcgcacgtgattccgcaggcgctgggccgcgtgcgg
cggttgtgcgacctgggctgccggcccgatgtggtcgatcagcatctgggcccgctggct
gccgaagcgcccggcatgcgcttgccgggcgcggtggatggcttcgagatcgccgtgcgc
gcggtggtgggccaggtgatctcggtgaagcacgcgcgcacgctgctggcgcggctggcc
gagcgccacggtttgccgctggcgcagcccatgccggcgctgcgcgtgacgtttcccggc
gcggctacgctggctggcgtgccgcccgaggccttgcgtgagatcggcatcccgctgggc
aagggccgggccattcatgccatcgcggcccgcgtggcggcgggcgcgctcaagctggag
cctgacgctgcgccggaagacaccatggcgcgcctgcgcgaggtggaaggcgtgggcgac
tggaccgcgcaatacgtggccatgcgcgcgctcggctggccggatgcctttcctggcacc
gactatgtcttgcgcaaggtgctcggcatcgctaccgtgcgaggcatgaaccagcatgtc
gcgcagtgggcgccgtggcgcgcctacgccgccgtccacctgtggcggcgctacgaggaa
cacaagccggataagccggataagccggacaagtcggacaagtcggacaagtcggacaag
tcggacaagtcggtacgaggcgacaagacaagggacacaaccagcgacacaacaaggaac
acaccatga
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