Cupriavidus basilensis: RR42_s0903
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Entry
RR42_s0903 CDS
T03642
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cbw
Cupriavidus basilensis
Pathway
cbw00061
Fatty acid biosynthesis
cbw00071
Fatty acid degradation
cbw01100
Metabolic pathways
cbw01212
Fatty acid metabolism
cbw02024
Quorum sensing
cbw04146
Peroxisome
Module
cbw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RR42_s0903
00071 Fatty acid degradation
RR42_s0903
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RR42_s0903
09145 Cellular community - prokaryotes
02024 Quorum sensing
RR42_s0903
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cbw01004
]
RR42_s0903
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbw04147
]
RR42_s0903
Enzymes [BR:
cbw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RR42_s0903
Lipid biosynthesis proteins [BR:
cbw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RR42_s0903
Exosome [BR:
cbw04147
]
Exosomal proteins
Exosomal proteins of breast milk
RR42_s0903
Exosomal proteins of breast cancer cells
RR42_s0903
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
BES1_N
Motif
Other DBs
NCBI-ProteinID:
AJG22493
UniProt:
A0A0C4YHL2
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All DBs
Position
secondary:complement(993261..994934)
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AA seq
557 aa
AA seq
DB search
MEARRWHSSYPAGIPLDIEVDATATLGPMIARAVASFATRPAVTCLEESLSYAEFGILSE
ALATFLQQSGLKKGDRVALMLPSCPAFLIGLAAVFQAGMVAVPVNPLYTPRELKHQLQDS
GATCIIVADQLQQSLQQVLEETSIVQVLTAPVVGMKPIAVQLAALAKDAGAVQHAGTTGG
RTCQPLAHAILQGSRGSLSPVAQTAQDIAILQYTGGTTGVSKGAVLTHKSVCASLAQVST
WVGPPLAGSEASMVTPLPLYHIFPLATALLALLLGCENRLVPNPREAGAVLAELKRRPFQ
IFIGVNTLFNSLVNTPELISVDFSATRLVIGAGASIQDAIAKRWLAAGAPPVTEAYGLTE
TSPSATFNPPGRSGTIGIPAPSTDVRLVDESGHDVPLGVAGELLIKGPQLFSGYWNQDDE
TRKAFLDGGWFRTGDIVVMDELGFMTMVDRKKDMILVSGFNVYPNEIEAVVAMMPDVLEA
ACIGVPDERSGEAPHLFIVPRNMALTTEQVEAHCRSHLAAYKVPRHITLIDALPKSTVGK
ILRRDLRSRLVAEQSNA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggaagccagacgctggcatagctcctatcccgccgggataccgcttgacattgaggtg
gacgcgacagcgacactggggcccatgattgcacgcgcggtcgcctcgttcgccacgcgt
cctgcggtaacctgcctggaggaatcacttagttacgcagagttcggtattctgtccgag
gcgctcgcgacgttcctgcagcaatcgggattgaaaaagggggaccgtgtagcgttgatg
ctgccaagctgcccagctttcctgatcggcctggcagcggtatttcaagcagggatggtg
gcggttccagtcaaccccctgtatacaccgcgtgaattgaagcatcagctgcaggattct
ggcgccacctgcattatcgtcgccgaccaactacagcagtcgctgcagcaagtgctggag
gaaaccagcattgttcaggtgctgacggcaccggttgttggaatgaagcctattgccgtt
caactcgcggcactcgcaaaagatgctggcgctgttcaacatgccggcacgaccggtggt
cgcacgtgccaacctttagcccacgcgattctgcagggaagcaggggcagtctttccccg
gtcgcacagaccgctcaggacatcgccattctgcaatacaccggtggcacgacgggcgtg
tccaagggggcagtcctcacgcacaagtcagtttgcgcgagtctggcgcaagtttcgact
tgggttggaccgcctctagcaggctcggaggcatcaatggtgacaccactgcctctgtat
catatcttcccgcttgcaactgcactactggcgctattgctcggttgtgagaatcgcttg
gttcccaatccgcgtgaggctggtgctgtgcttgctgagttgaagcggcggccattccag
atttttatcggggtcaacaccttgttcaacagcttggtgaacacaccggaactcatttcc
gtagacttcagcgccacgcgtttggtgattggcgccggggcatcaatccaggacgctatt
gcaaagcgatggctcgcggccggtgctccccctgttaccgaagcctatggtcttacagag
acctcaccgagcgccaccttcaatcctcctgggcgaagcgggacgatcggcattcctgcg
ccttcgaccgacgttcgcctggtagatgaaagtgggcacgacgtcccacttggtgttgca
ggcgaacttctgatcaagggaccacaactcttcagcggatattggaatcaagacgacgaa
acacggaaagcgttccttgatggtggctggttcaggacgggcgacattgttgtcatggac
gaattgggcttcatgacaatggtcgaccgcaagaaggacatgattctcgtctcaggcttc
aacgtctatccgaatgagatcgaggccgtcgtcgcaatgatgcccgatgtcctcgaggca
gcctgtatcggggtgcctgacgagcgttctggcgaggccccgcacctcttcatcgtgcca
cgcaacatggcgctcaccacggaacaagtggaggcacactgtcgctcccatcttgcggcc
tataaagtgccacgacacattacgctgatcgatgccctccccaaatcaacggttggcaag
atcctgcgtagagacttgcgttcgcgcttggttgccgagcaaagcaatgcataa
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