Cupriavidus basilensis: RR42_s1268
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Entry
RR42_s1268 CDS
T03642
Name
(GenBank) Phytoene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
cbw
Cupriavidus basilensis
Pathway
cbw00100
Steroid biosynthesis
cbw00909
Sesquiterpenoid and triterpenoid biosynthesis
cbw01100
Metabolic pathways
cbw01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
RR42_s1268
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
RR42_s1268
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cbw01006
]
RR42_s1268
Enzymes [BR:
cbw01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
RR42_s1268
Prenyltransferases [BR:
cbw01006
]
Terpene biosynthesis
Squalene/phytoene synthase
RR42_s1268
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
SufE
Motif
Other DBs
NCBI-ProteinID:
AJG22856
UniProt:
A0A0C4YQI4
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Position
secondary:complement(1397693..1398745)
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AA seq
350 aa
AA seq
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MPNPTRAFLLGPLLKGVSRSFYLTLRVLPAGMRDPIGLAYLLARAADTIADTALIPPQQR
LELLLSLRDQVNGATDDGTLMRRLAAEVAGQQALSDEKVLLESLGPALTMLSRLSAADRT
AVREIVSTLASGMEFDLRTFPDESSGQIGVLREWEELDRYTYLVAGCVGEFWTKMTYAHM
PGTLKADSEAMLLRGVRFGKALQMTNVLRDCAKDLRIGRCYLPGTMLDRYGLTPQDLLLP
GNSARAKPLLFALIRTTLGHFREAVDYTFAIPAFSVRLRLACLWPVLIGLETLLLLAGND
DWLDPAKVSKIRRSEVYRIVGYSALMAPSNGLLRIWIERLIGGIEARLED
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaccctacccgggccttccttcttggcccgctgctcaaaggcgtttcacgctct
ttctatctcaccctgcgggtgctgcccgccgggatgcgcgatccgatcggcctggcttat
ctgctggcgcgcgccgccgacaccattgcggacaccgcgctgattccaccgcagcaacgg
ctggaactgctgctgtcgctgcgcgatcaggtcaacggcgccacggacgacggcacgctc
atgcggcggctggcggcggaggtcgccgggcagcaagcgctatcggacgagaaggttctg
ctcgaatcgctcggcccggcgctgacgatgctgtcccggctgagcgcggccgatcggaca
gcggttcgcgagatcgtgtcgaccctggcctccggcatggaatttgatctgcgcacgttc
cccgacgaaagctccgggcagattggcgtgctgcgcgaatgggaagagctggaccggtac
acctacctggtcgcgggatgcgtgggggagttctggaccaagatgacctacgcccatatg
cccgggacgctcaaggcagactccgaggcgatgctgctgcgaggcgtgcgctttggcaag
gcgctgcagatgaccaatgtgctgcgggactgcgccaaggacctgcggatcgggcgctgc
tacctgcccgggacgatgctggaccggtatggactgacgccgcaagacttgctgttgcca
ggcaattcagcgcgtgcgaaaccacttctgttcgcgctgatccgcacgacgctgggtcat
ttccgtgaggcggtggattacacgtttgccattcctgcgttctctgttcgattgcgcctg
gcgtgcttgtggccggtgcttatcgggctggagacgctgctgctgcttgcgggcaatgac
gattggctggatccggcgaaggtgtccaagatacggcgcagcgaggtgtatcggattgtg
gggtattcggcgttgatggcgccgtccaatggcttgctgcggatctggattgagcggttg
atcggggggatcgaggcgcggctggaagattaa
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