Cupriavidus basilensis: RR42_s1336
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Entry
RR42_s1336 CDS
T03642
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cbw
Cupriavidus basilensis
Pathway
cbw00061
Fatty acid biosynthesis
cbw00071
Fatty acid degradation
cbw01100
Metabolic pathways
cbw01212
Fatty acid metabolism
cbw02024
Quorum sensing
cbw04146
Peroxisome
Module
cbw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RR42_s1336
00071 Fatty acid degradation
RR42_s1336
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RR42_s1336
09145 Cellular community - prokaryotes
02024 Quorum sensing
RR42_s1336
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cbw01004
]
RR42_s1336
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbw04147
]
RR42_s1336
Enzymes [BR:
cbw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RR42_s1336
Lipid biosynthesis proteins [BR:
cbw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RR42_s1336
Exosome [BR:
cbw04147
]
Exosomal proteins
Exosomal proteins of breast milk
RR42_s1336
Exosomal proteins of breast cancer cells
RR42_s1336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AJG22924
UniProt:
A0A0C4YLM3
LinkDB
All DBs
Position
secondary:complement(1463169..1464722)
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AA seq
517 aa
AA seq
DB search
MSPTSTDFTPLAALVDAQAALRPRHPAVVLDERSVDFASLNRLADRVAAALQRDGVPAQG
AVAICAATSIEYVAAFLGSLRAGVTVAPLSPSLNPQTLRAMVQDSGACRLLIDASTHQAL
HGLEAELGIPCIALDDSHAGIAFGQWLAPEHARPAAVDVQPDWAFNLIYSSGTTGVPKGI
IQPFGMRSSHVQRATQGGYGPDTVALLSTPLYSNTTLVSLFPTLSLGGTVVLMRKFDAGQ
YLALAARHRVTHTMLVPVQYQRILAHPDFASTDLSSFRYKFCTSAPFSAALKAQVLARWP
GALIEYYGMTEGGGRCELRAHEHPDKLHTVGRPSPDTDMRLLDDQGRELPADAPRDAPGE
IVGHSPAMMSGYHNHPAKTAEAEWFDATGKRFIRTGDVGYFDADGFLILMDRKKDMVISG
GFNIYPSDIEAVLLEHPDIADAAVVGVPSERWGETPVAFVVLQPGAIAQAAALLDWVNGR
LEKMQRLAALELSQELPRNAIGKVLKRDLRDQYGRAP
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccgaccagcactgacttcacccctctcgccgccctcgtcgacgcccaggccgcg
ctgcggccgcggcatccggccgtggtgctggacgaacgcagcgtggatttcgccagcctc
aaccggctcgccgaccgcgttgccgccgcgctgcagcgagacggtgtgccggcgcaaggc
gccgtcgccatctgcgccgcgacgtcgatcgagtacgtcgcggccttcctcggcagcctg
cgggcaggcgtgacggtggcaccgctgtcgccctcgctcaacccgcagacgctgcgcgcc
atggtgcaggactcgggggcgtgccggctgttgatcgatgccagcacgcaccaggccctg
cacgggctggaggccgagctcggcattccctgcatcgcgctggacgacagccacgcgggc
attgcctttggccagtggctggcccccgaacatgcccggccggctgcggtcgacgtacag
cccgactgggcgttcaacctgatctattcatccggcaccaccggcgtgcccaagggcatc
atccagccgttcggcatgcgctcgtcgcatgtgcagcgcgccacccagggcggctatggc
cccgacaccgtggcgctgctatccacgccgctatactccaacaccacactggtcagcctg
ttccccaccttgtcgctgggtggcaccgtggtgctgatgcgcaagttcgatgccggccag
tacctggcgctggccgcacggcaccgcgtcacccataccatgctggtgccggtgcaatac
cagcgcatcctggcccaccctgactttgccagcaccgacctgtcatcgttccgctataag
ttctgcaccagcgcgcccttttccgccgcgctcaaggcccaggtgctggcacgctggccc
ggcgcgctgatcgagtactacggcatgaccgagggcggcgggcgctgcgagctgcgcgcg
catgagcacccggacaagctgcatacggtcgggcgcccctcgccggacaccgatatgcgg
ctgctggacgatcaaggccgcgagctccccgccgatgcgccgcgcgacgccccgggagag
atcgtcgggcattcccccgcgatgatgtccggctaccacaatcatccagcgaagaccgcc
gaggccgagtggttcgacgccaccggcaagcgcttcatccgcaccggcgacgttggctac
ttcgatgccgacggcttcctcatcctgatggaccgcaagaaggacatggtcatctcgggc
ggcttcaacatctacccgagcgacatcgaagcggtgctgctcgagcatcccgacatcgcg
gacgcggcagtggtcggcgtgccctcggagcgctggggcgagacgcccgtggccttcgtg
gtgctgcagcccggcgccatcgcccaagcggccgcgctgctggactgggtgaatggccgg
ctagagaaaatgcagcgcctggctgcgctggagctgtcgcaggaactaccgcgcaacgcc
atcggcaaggtgctcaagcgcgatctgcgcgaccagtacggacgcgcgccttga
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