Cupriavidus basilensis: RR42_s1694
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Entry
RR42_s1694 CDS
T03642
Name
(GenBank) Sigma-54 dependent transcriptional activator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
cbw
Cupriavidus basilensis
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbw03000
]
RR42_s1694
Transcription factors [BR:
cbw03000
]
Prokaryotic type
Helix-turn-helix
Other families
RR42_s1694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
AAA_5
AAA_2
Mg_chelatase
AAA
HTH_30
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AJG23282
UniProt:
A0A0C4YCG1
LinkDB
All DBs
Position
secondary:1840906..1842927
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AA seq
673 aa
AA seq
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MQEAGTPMDWFSHPDHDASIMSAWEHLIDGGEASAGELRCVVDDSWRRCLVGQVDPGAGA
APPPLDEAGLRVRREKNDRLVSASLPLIQQTREFLSQTGTIMLLADPDGMILQQEGDMHI
VEPAGEVGLIPGCDWTELNCGTNAIGTALALQQPVQIHGAEHFCAGIKRWTCSATVIRDP
LDGGVLGVIDVSGLAQTYSRHSLALTVSLAGRIESRLAKLAMERRLRLLDRCMSHFASVR
SDGVLVLDEGGRLVKANPQAPSALARLGVSTILNSAFSIPGLDARVARAGSAPLPEWLRL
TRFEAIRDSGDMLGFVVVIPAAPHRPASGAAGAPAARLGAAPAFSSIVGNGVALRSAVEK
AQHLAPSKVPVLLLGETGVGKELFAQGIHQASACADGPFVALNCGGLSRDLLASELFGYA
EGAFTGARRSGAAGKIEAANRGTLFLDEIGEMPLDIQPHLLRVLEEGEIYRLGENTPRKV
SFRLVAATHRNLRDDVAAGKFRMDLFYRIAVTNIAIPPLRERKDDIPALVTHWLGRLCER
YGVPVASFDDEAYRCLLAYDWPGNVRELRNALEGSLLMAEGGVITLDKLPLEISAVGMPG
GAGRAKDIAGSVPEPVCSLEMAESDSIRKALAYSGGNLTRTASRLGIAKSTLYQKIRKYG
LGAALSETRGRVT
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagccggtacaccgatggactggttttcccatcccgaccatgacgccagcatc
atgtccgcctgggagcacctgatcgatggcggtgaggcgagcgctggcgaactgcgctgc
gtggtcgacgattcctggcgccggtgcctggtgggccaggttgatcctggcgccggggcc
gcgccaccgccgctggacgaagccggcctgagagtccggcgggagaagaatgatcgcctg
gtcagcgccagcctgccactgatacagcagacccgcgagtttctttcgcagacgggcacc
atcatgctgctggccgatcctgacgggatgatcctccagcaggagggcgatatgcatatc
gtcgagcccgccggtgaagtcggcctgattccgggctgcgactggacggagcttaactgc
gggaccaatgccatcggtaccgcgctggccttgcaacaacccgtgcagatccatggtgcc
gagcatttttgcgccggtatcaagcgctggacctgctcagccaccgtcatccgtgatccg
ctggacggcggcgtgctgggtgtgatcgacgtgtcaggtttggcgcagacctatagcagg
catagcctggcgctgaccgtatcgctggcgggccggatcgagagccggctggccaagctg
gccatggagcgccgcctgcggctgctggatcgctgcatgagccattttgcgtcggtgcgc
agcgacggggtgctcgtccttgacgaaggcgggcgcctggtcaaggccaatccgcaggcg
ccttcagcgctggcgcggctgggcgtgagcacaattttgaacagcgcgttttccattccc
ggcctggacgcccgtgtggcgcgcgccggatccgcgccgctccccgaatggcttcggctg
acccgcttcgaagcgatccgcgatagcggcgacatgctgggattcgtggttgtgatccct
gccgcgccgcatcgtcctgcatcgggtgctgccggcgcgcctgccgcgcggctgggtgcg
gcgccggcgttttccagcatcgttggcaacggcgtggccttgcgctcggctgtggagaag
gcgcagcacctggcgccgtccaaggtgccggtgctgctgctgggcgaaaccggcgtcggc
aaggaattgttcgcgcagggaattcaccaggccagcgcctgcgcggacggcccgttcgtg
gcgctcaactgcggggggctgtcacgggacctgcttgcgagcgagctctttggctatgcc
gagggggcgttcaccggcgcgcgccgatcgggcgcggccggcaagatcgaggccgctaac
cgggggacgctgtttctcgacgagattggcgaaatgccgctcgacatacagccccacctg
ctgcgtgtgctggaagagggagagatctaccggctgggcgagaacacgccgcgcaaggtc
agttttcgcctggtcgccgccacccaccggaacctgcgtgacgacgtggccgcggggaaa
ttccgcatggacctgttctaccgcatcgccgtgaccaatatcgcgatacctcccttgcgc
gagcgcaaggacgacatcccggccctggtcacgcactggctgggccggctatgcgagcgc
tatggggtgccggtggcctcgttcgacgatgaggcttaccgatgcctgcttgcctacgac
tggccgggcaatgtccgcgagttgcgcaatgcgctcgagggctccttgctgatggccgaa
ggcggcgtgatcaccctggacaagctgccgctcgaaatcagcgcggtgggcatgccgggc
ggggcgggccgggcgaaggacatcgccggcagtgtgcccgagccggtttgctcactggag
atggccgaatcggattccatccgcaaagccctggcatacagcggcggcaacctgaccagg
acagcttcgcggctcggcatcgcgaagagcaccctgtaccagaagatccggaaatacggg
ttgggtgctgcgctgagcgaaacacgcgggcgggtaacctag
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