Cupriavidus basilensis: RR42_s2163
Help
Entry
RR42_s2163 CDS
T03642
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cbw
Cupriavidus basilensis
Pathway
cbw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RR42_s2163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbw03021
]
RR42_s2163
Transcription machinery [BR:
cbw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RR42_s2163
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
PhyR_sigma-like
Rv2175c_wHTH
Sigma70_ECF
Phage_terminase
HI_1423
Motif
Other DBs
NCBI-ProteinID:
AJG23745
UniProt:
A0A0C4YME5
LinkDB
All DBs
Position
secondary:2366544..2367053
Genome browser
AA seq
169 aa
AA seq
DB search
MVTADTLPQSELHALYRNHHGWLVNLLWRKLGNADNAADLAQDTFARLLVACDASSLREP
RAYLTTVASRLTAQYFRRLALERAYLEALALQPEAAAPSPETRALVVEALTAVSTVLEQL
PPRVCEAFLLSQLDGLAYKDIAQRLGVTVNVVQKWMSKAFLHCYTAVYG
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggtcacggcagacacccttccccagtcggaactccacgcgctttaccgcaatcaccac
ggctggctcgtcaacctgctatggcgcaagctgggcaatgcggacaacgcagccgacctg
gcccaggacacgtttgcacggctgctggtggcttgcgacgctagctcgctacgcgagccg
cgcgcctacctgaccaccgtagcaagccgcctgaccgcgcaatatttccggcgcctggcg
ctggaacgcgcctacctggaagcgctcgccctgcagcccgaagccgccgccccgtcgccc
gagacccgcgcgctggtggtggaggcgctcaccgccgtcagcacggtgctcgagcagctt
cccccgcgcgtgtgcgaggccttcctgctgtcgcaactggacggcctggcctacaaggac
atcgcgcagcggctcggcgtcaccgtcaacgtggtccagaaatggatgagcaaggccttc
ctgcattgctataccgcggtgtacggatga
DBGET
integrated database retrieval system
