Cupriavidus basilensis: RR42_s2825
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Entry
RR42_s2825 CDS
T03642
Name
(GenBank) Nitrogen regulation protein NR(I)
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
cbw
Cupriavidus basilensis
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbw03000
]
RR42_s2825
Transcription factors [BR:
cbw03000
]
Prokaryotic type
Helix-turn-helix
Other families
RR42_s2825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
GAF
HTH_30
AAA_5
HTH_28
HTH_50
Mg_chelatase
HTH_29
HTH_1
HTH_23
HTH_Tnp_ISL3
HTH_22
Phage-MuB_C
HTH_IclR
AAA_16
MCM
HTH_AsnC-type
AAA
HTH_24
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AJG24406
UniProt:
A0A0C4YUY6
LinkDB
All DBs
Position
secondary:complement(3116377..3118302)
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AA seq
641 aa
AA seq
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MSSTLASHAATPHADPERHILIARAHARSTGFGLEATHAADYQSLGARALHELVDANQML
YKHALPVMETLHAQIANTESMVLLTDSGGVILHSLGDGDFADRARRVALAPGVSWAESSK
GTNAIGTALAEARPAVVHADEHFLRANRTLTCSCVPISGPFGQMLGALDVSGDHRGFHKH
TMALVRMSAQMIENHLFSTHFTDAALVRFHARPEFVGTLFEGMAAFAPDGTFLAANRSGL
FQLGLSPDTLNRQSFAALFGMPLGTALKQGVDAPGQLLTLTLPSRVLVFARIALLAPPRR
AQAARATKSATTSALAALDTGDARMAAVLQRVDKVRGRDIPILVLGRTGTGKEWLARAIH
RDSPRGAAPFVAVNCASIPESLIEAELFGYEDGAFTGARRRGSPGKLVQAHGGTLFLDEI
GDMPLAQQVRLMRVLQERAVTPLGGAHAIPVDLRIICATHRDLRAMIAAGTFREDLYYRI
NALSVTLPALRERTDLPVLVERILTQQLAQAEHGDAHPTRVAADVLAHFQRHPWPGNLRQ
MVNVLRTAAIMAEGEEEIRVEHLPEDFEREPMFAQDSDAASAFMPPTPVMPVTPAGTPER
LRDREAAMIHQALARHGGNVSLAARELGLSRNTIYRRLKRS
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcacgcttgccagccacgccgcaacgccgcacgccgatccggagcgccacatc
ctgattgcgcgcgcgcacgcgcgctccaccggtttcggcctcgaagccacccatgcggcg
gactatcaatcgctgggcgcgcgcgcgctgcacgaactggtcgacgccaaccagatgctg
tacaagcatgcgctgccggtcatggaaaccctgcacgcgcagatcgccaataccgagagc
atggtgctgctgaccgacagcggcggcgtgatcctgcacagcctgggcgacggcgatttt
gccgaccgggccaggcgcgtggccttggcgccgggcgtctcgtgggcggagtcgagcaag
ggcaccaacgccatcggcaccgcgctggccgaggcccggccggcggtggtccatgccgac
gagcatttcctgcgtgccaaccgcacgctgacctgttcctgcgtgccgatctccgggccg
tttggccaaatgcttggggcgctcgacgtcagcggcgatcatcgcggcttccacaagcac
accatggcgctggtgcgcatgtcggcgcagatgatcgagaaccatctgttttccacccat
ttcaccgatgccgcgctggtgcgctttcacgcgcggccggagttcgtgggcacgctgttc
gaaggcatggcggcgttcgcgcccgatggcaccttcctggcggccaaccgcagcgggctg
ttccagctcggcctgtctcccgatacgctgaaccgccagagttttgccgccttgttcggc
atgccgctgggcaccgcgctcaagcagggcgtcgatgcgccgggccagttgttgacactg
accctgccaagccgtgtgctcgtgttcgcgcgcatcgcgctgctcgcgccgccgcgccgc
gcgcaggccgcgcgtgcaaccaaatcggcaactacctcggcgctggccgctctcgatacc
ggggatgctcgcatggccgccgtgctgcagcgggtcgacaaggtgcgcggacgtgatatt
cccatcctggtgctgggccgcaccggtaccggcaaggagtggctggcgcgcgccatccat
cgcgattcgccacgcggcgcggcgccattcgtggccgtgaattgcgcgtcgatcccggag
tccctgatcgaggcggagctgttcggttacgaggacggggcgttcaccggcgcgcggcgg
cgtggcagcccgggcaagctggtgcaggcgcacggcggcaccttgttccttgatgagatc
ggcgacatgccgctggcgcagcaggtgcggctcatgcgcgtgctgcaggagcgcgcggtg
accccgctgggcggcgcccacgcgattccagtggatttgcgcatcatctgcgccacccac
cgcgacctgcgcgccatgatcgcggcaggcaccttccgcgaggatctgtactaccgcatc
aatgcgctatcggtgacgctgccggcgctgcgcgagcgcaccgacctgccggtgctggtg
gagcgtatcctgacgcagcaactcgcgcaggcggagcacggtgacgcgcatccaacccgc
gtcgccgcggacgtgctggcgcattttcagcgccatccctggccgggcaacctgcgccag
atggtcaacgtgctgcgcaccgcggccatcatggccgaaggcgaagaagagattcgcgtg
gagcatctgccggaggatttcgagcgtgagccgatgttcgcgcaggacagcgacgccgca
tcagccttcatgcccccgacgccggtgatgcccgtgacccccgccggtacccccgagcgc
ctgcgcgatcgggaagccgccatgatccaccaggcgctggcgcgccacggcggcaacgtc
agcctggccgcgcgcgagcttggcctgtcgcgcaatacgatttaccggcggctaaagagg
agctaa
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