Cupriavidus basilensis: RR42_s3167
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Entry
RR42_s3167 CDS
T03642
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cbw
Cupriavidus basilensis
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbw03400
]
RR42_s3167
DNA repair and recombination proteins [BR:
cbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RR42_s3167
Archaeal homologous recombinant proteins
RR42_s3167
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Lipase_GDSL_2
Motif
Other DBs
NCBI-ProteinID:
AJG24748
UniProt:
A0A0C4YNZ7
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Position
secondary:complement(3510502..3511647)
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AA seq
381 aa
AA seq
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MRFLHTADWHLGRVFHARSLLEDQAWMLDQFVALVRERRPDAVLIAGDVYDRAVPPPEAV
ALLDDVLARIVADAGIPVVMIAGNHDSAQRLGFGARLLTAQGLHVAGITERDATCVTLSD
AHGEVRIYALPYAEPATVRDAFDMEVPGHEAALAARLDAIRASHPAQARSVVVAHAFVIG
GEASESERPLSVGGSGAVAASVFDGFDLVALGHLHRPQTFGQRIHYAGSLLKYSLSEVTH
AKSVSLIELAADGAVSIEPIALTPRRDLRIVEGQLADLLAQGAADPRRDDYIHAVLTDNG
ALLDPMARLRQAYPNALAIERAVLARSGEAGAAGQRLRQLDTGELFANFFKEVADEALDD
DKRRVLDQVLEGIARADRESA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
ttgcgttttcttcacactgccgactggcatctcgggcgcgtattccacgcgcgcagcctg
cttgaagaccaggcctggatgcttgaccaatttgttgcgctggtgcgcgagcgccggccg
gatgcggtgctgatcgccggggacgtgtatgaccgcgcggtgccgccgcccgaggccgtg
gcgctgctggacgacgtgctggcccgcatcgtggcggatgccggcattccggtggtgatg
atcgcgggcaatcacgacagcgcccagcggcttggtttcggcgcgcggctgctgacggcg
cagggtttgcatgtggccggcatcaccgagcgcgatgccacctgcgtgaccttgtccgat
gcccatggcgaagtaaggatctacgccttgccctatgccgagcccgcaaccgtgcgcgac
gccttcgacatggaggtgccagggcacgaggcggcgttggcggcgcgcctggacgcgatc
cgcgccagccatccggcgcaggcgcgttcggtggtggtggcccacgctttcgtgatcggt
ggcgaggccagcgaatccgagcggccgctgtcggttggcggcagcggcgccgttgccgcc
agcgtgttcgacggcttcgacctggtcgcgcttggccacctgcatcgcccgcagaccttc
ggccagcgcatccactacgccggctccttgctgaagtactcgctgtccgaagtcacgcat
gccaagtcggtctcgctgatcgaactggcggccgatggcgcggtcagcatcgagccgatc
gcgctgacgccccggcgcgacctgcgcatcgtcgaagggcaactggccgatctgctggcg
caaggcgcggcagacccgcggcgcgatgactacatccacgcggtgttgaccgacaacggc
gccttgctcgatccgatggcgcgcctgcgccaggcttatcccaatgcgctcgccatcgag
cgcgccgtgctggcgcgttcgggcgaggccggggcggcaggccagcgcctgcgtcagctc
gataccggcgagctgttcgccaacttcttcaaggaggtggcggacgaagcgctggacgac
gataagcgccgcgtgctcgaccaggtgcttgagggcatcgcccgcgccgaccgggagtcc
gcatga
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