Cupriavidus basilensis: RR42_s3225
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Entry
RR42_s3225 CDS
T03642
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cbw
Cupriavidus basilensis
Pathway
cbw03030
DNA replication
cbw03430
Mismatch repair
cbw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RR42_s3225
03430 Mismatch repair
RR42_s3225
03440 Homologous recombination
RR42_s3225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbw03032
]
RR42_s3225
03400 DNA repair and recombination proteins [BR:
cbw03400
]
RR42_s3225
Enzymes [BR:
cbw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RR42_s3225
DNA replication proteins [BR:
cbw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RR42_s3225
DNA repair and recombination proteins [BR:
cbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RR42_s3225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AJG24801
UniProt:
A0A0C4YWC6
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All DBs
Position
secondary:3569886..3571484
Genome browser
AA seq
532 aa
AA seq
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MPDLPIYQPSHQPADAPRHLDAQALAAALSRPIVFVDLETTGADGTRDRITEIGVVEVGP
DGIVEWDTLIDPGIGIPPFIQQLTGITDDMVRGRPSFESLAETLAERLQGKLFVAHNARF
DYGFLKNEFRRVGVTFRADVLCTLRLSRSLFPSAARHGLDALIARFELQPKGRHRALADA
ELLWQFWQKVHELYTMDLVESAVQSLIKRASLPAGLEETALDDVPDTPGVYLFYGDQDMP
LYIGKSIHLRQRIGAHFSGDHRAALEMRLARAVRRVEWRETGGEAGALLLEAHLIKTMQP
LHNQMLRRNAGLYAWELAPGLSAPILRSDRNTDFSRHPNLYGAFPSRASAQARLAELAQT
HQLCQVALALEKTARQGLPCFAHQLHRCLGACTGEESLATHRERAVTALASLAIRPWPFA
GAVAWREQHGAKAWWHVLEDWCYLGSVATLEEAPGLLSSPARFDLDTYQILAPRLPALLA
AAVPLEAVRRFELQPLAAPRAETQPQTTSPRAAPHRRKLPSPDQQTLPFFER
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaccttcctatctaccagccatcgcaccagccggcggatgcgccccggcatctg
gatgcacaggcgctggcagctgcactttcacgtccgattgtctttgtcgacctggaaacg
acgggtgccgacggcacccgcgaccgtattaccgagattggcgtcgtggaagtgggaccg
gatggtattgtcgaatgggacaccctgatagacccgggcattggcatcccgccctttatc
cagcagctgaccggcatcaccgacgacatggtgcgcggtcggccaagctttgagtcattg
gcggaaacgctcgcggagcggctgcaaggcaagctcttcgtggcgcacaacgcacgtttc
gactatggcttcctcaagaatgagtttcgccgcgtcggtgtcacctttcgcgccgatgtc
ctgtgcacgttacggctatcgcgctcgctgtttccctcggcggcgcgccacgggctggat
gcgctgatcgcccggttcgagttgcagcccaaaggccggcaccgggctctcgccgatgcc
gagctgttgtggcaattctggcagaaggtccacgagctctacacgatggacctggtcgaa
tccgcagtgcagtcgctgatcaagcgggcgagcctgcccgccgggctcgaagaaaccgcg
ctggacgacgttcccgacaccccgggcgtctatctcttttatggcgaccaggacatgcct
ctctacatagggaagagcatccacctgcgccaacgcattggcgcgcatttctccggtgat
catcgtgctgccctggaaatgcggctggcgcgcgcggtgcgccgcgtcgaatggcgcgag
accggcggtgaggccggcgcgttgctgctggaggcgcacctgatcaagacgatgcagccg
ctgcacaaccagatgctgcgccggaatgccgggctctacgcgtgggagctggcccccggc
ctgagcgcgccgatattgcgctcggatcgcaacaccgatttcagccggcaccctaaccta
tatggcgcctttcccagccgggccagcgcccaggcccggctggccgaactggcccaaacc
catcaactctgccaggtcgccctcgccctggagaaaaccgcgcggcaaggcctgccctgc
ttcgcgcatcaactgcaccgctgcctgggcgcgtgcaccggcgaagagtccctcgcaacg
caccgcgagcgggcggtcactgcactggccagcctggcgattcggccctggccgttcgcg
ggtgcagtggcatggcgcgagcagcacggcgccaaggcgtggtggcatgtcctggaagac
tggtgttacctgggctcggtggccacgctggaggaggcaccgggcttgttgtcctcgcct
gcgcgctttgacctggacacctatcaaatcctggcgccacggctgccggccttgctcgcc
gctgccgttccactggaagcggtgcggcgattcgagctgcaaccactggccgcgccccgg
gcggaaacacagccgcagactacatcgccccgggcggcgccccaccggcgcaagctgcca
agcccagaccaacagaccttgcctttcttcgagcgctag
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