Cupriavidus basilensis: RR42_s3258
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Entry
RR42_s3258 CDS
T03642
Name
(GenBank) Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster
KO
K22549
D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-]
Organism
cbw
Cupriavidus basilensis
Pathway
cbw00470
D-Amino acid metabolism
cbw01100
Metabolic pathways
Module
cbw_M00948
Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RR42_s3258
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
FAD_oxidored
HI0933_like
NAD_binding_8
Thi4
FAD_binding_2
DAO
GIDA
AlaDh_PNT_C
XdhC_C
FAD_binding_3
NAD_binding_7
NAD_binding_9
Pyr_redox
Lycopene_cycl
Pyr_redox_3
2-Hacid_dh_C
LAP2alpha
ThiF
EVA_Class_A
Motif
Other DBs
NCBI-ProteinID:
AJG24834
UniProt:
A0A0C4YSC4
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Position
secondary:3608404..3609705
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AA seq
433 aa
AA seq
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MSPQQSGIGQAPASCQRRYDVLIVGAGPAGMAAARAAAASGCSVALIDDNPAPGGQIWRD
GPGGRLPWQARSLRHAIAAQDRIALFASTRVIAAPASRTLLVENDESAMHLQFRNLILCT
GARELLLPFPGWTLPGVTGAGGLQALVKAGTPVRGERIVIAGSGPLLLAAAATARRHGAH
VARIAEQAPLSRLTRFAGALWRWPSKAAQAVALLDGHYRASSHVLEALGEERLQAVRIRQ
GGRTVALACDRLACGFGLVPNTGLAVLLGCALDAVSDAIAVDALQRTGLPHVYAAGECTG
IGGSELALIEGRIAGYAAAGADERASALTAKRARWHAFAQRVRTAFALDPVLGTLARADT
PLCRCEDVPLSAIRAHPDAWQARMQSRCGMGACQGRVCVTAGRLLFGWAQSTPRPPLSPA
RIGTLMLDENGRS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgcagcaatccggcatcggccaggcaccggcctcttgccagcgccgctacgac
gtgctgatcgtcggcgccgggcccgcgggcatggcggcggcgcgcgcggcggccgcgagc
ggctgcagcgtcgcactgatcgatgacaacccggcgcccggcgggcagatctggcgcgac
gggccgggcgggcggctgccatggcaggcgcgcagcctgcgccacgccatcgccgcgcaa
gaccgcatcgcgctgttcgcctcgacgcgcgtcatcgcggcgccagcgtcccgcacgctg
ctggtcgagaacgacgagagcgccatgcacctgcaattccgcaacctgatcctgtgcacc
ggtgcgcgcgaactgctgctgccttttcccggctggaccctgcccggcgtgaccggggcg
ggcgggttacaggctctggtcaaggcgggcacgccggtcaggggcgagcgcatcgtcata
gccggcagcgggccgctgctgctggcggcggccgccactgcgcgccggcacggcgcgcac
gttgcgcgcattgccgagcaggcgccgctgtcacgcctgacgcgttttgctggcgcgctg
tggcgctggccgtccaaggcggcacaggcggtggcgctgctcgatggccactatcgggcg
agctcccatgtgctggaggcactgggtgaggagcgcctgcaagcagtgcgcatccgccag
ggcgggcgtaccgtggcgcttgcctgcgaccggctggcgtgcggcttcgggctggtgccg
aataccgggctggccgtgctgctgggctgcgcgctcgacgccgtatcggatgcgattgcc
gtcgatgcgctccagcgcaccggcctgcctcacgtctatgcggcgggcgaatgcacgggt
atcggcggcagcgagctggccctgatcgaaggcaggatcgccggctacgcggccgcgggc
gccgacgagcgggccagcgcgctgacggcgaagcgcgcgcgctggcacgcgttcgcgcaa
cgcgtgcggaccgctttcgcgctcgaccctgtgcttgggacgctggcccgcgccgacacg
ccgctgtgccgctgcgaggacgtgccgctatcggccatccgtgcgcatccggatgcctgg
caggccaggatgcagagccgctgcggcatgggtgcctgccagggacgtgtctgcgtcacg
gccgggcggctcctgttcggctgggcgcagtccacaccgcgcccgccgctgtctcccgcc
cggatcggcaccttgatgctggacgagaacgggcgaagctga
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