Cupriavidus basilensis: RR42_s3418
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Entry
RR42_s3418 CDS
T03642
Name
(GenBank) Ku domain protein
KO
K10979
DNA end-binding protein Ku
Organism
cbw
Cupriavidus basilensis
Pathway
cbw03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
RR42_s3418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbw03400
]
RR42_s3418
DNA repair and recombination proteins [BR:
cbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
RR42_s3418
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AJG24994
UniProt:
A0A0C4YST3
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All DBs
Position
secondary:3786247..3787161
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AA seq
304 aa
AA seq
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MPAHSIASLSLSFGLVSIPVKLYTATESQSAVKFNYMCKDGSRAKQQYVSEKTGQVVERA
DLQKGYEFDKDRYVLFSPEELKALEESANHVVEIVAFIPEKTVDPLYYDKAYFVAPDKRG
SKPYNLLKDAMLKSGRCALAKWASKGKTHMVQIRPAEDGLVFQQLLFADEVRSMKELHIE
QVDVSDAELKLALQIIDQAAEDSYEPTQYEDEEKKRILQAIDAKIAGKQIVSPEQVEVSA
SGQVIDLMEALRASLAKGGRKAKPPAATAKAPVEEVADLVTKERKSVKRAEKVAEAPSRV
RARK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgccggcccattccatcgcatcgttgtccctttccttcggcttggtttccataccggtc
aagctatacaccgccacggagagtcagagcgccgtcaagttcaactacatgtgcaaggac
ggctcccgcgccaagcaacagtacgtttcagagaagacaggtcaggtggttgagcgtgct
gacctgcagaagggctacgagtttgataaggaccgctatgtcctattctcgccggaggag
ctaaaggcgttggaggaaagcgcaaaccatgtcgtcgaaatcgtggcgttcatcccagag
aagactgtcgacccactgtactatgacaaggcgtacttcgtcgcacccgacaagcggggc
agcaagccctacaacttgctgaaggacgccatgctgaagagcggccgctgcgcgctggca
aagtgggcatcgaaagggaagacgcatatggtgcagattcgcccggcagaggatggcttg
gtgttccagcagttgctgttcgctgatgaagtccggtcaatgaaagaactgcacatcgaa
caggtcgacgtttccgacgccgagttaaagcttgcgctgcaaattattgaccaggccgca
gaggatagctacgagcccacgcaatacgaggacgaagagaagaagcgcatccttcaggcc
atcgacgcgaagattgcaggcaaacagattgtctcgcccgagcaagtcgaggtgtcggcc
agcggccaagttattgaccttatggaagcgctgcgagcaagcttggctaagggtggcaga
aaagccaagccgccagcggccacggccaaagcgcctgtcgaggaagtcgcggacctcgta
acgaaggagcgcaagagcgtgaaacgcgctgagaaggtcgctgaagcaccctcgcgagta
cgagctcggaagtga
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