Candidatus Symbiobacter mobilis: Cenrod_0315
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Entry
Cenrod_0315 CDS
T02877
Name
(GenBank) NtrC family response regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
cbx
Candidatus Symbiobacter mobilis
Pathway
cbx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cbx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cenrod_0315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cbx02022
]
Cenrod_0315
02035 Bacterial motility proteins [BR:
cbx02035
]
Cenrod_0315
Two-component system [BR:
cbx02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
Cenrod_0315
Bacterial motility proteins [BR:
cbx02035
]
Pilus system
Twitching motility proteins
Cenrod_0315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
AAA
AAA_19
VMAP-M8
AAA_3
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AGX86439
UniProt:
U5N8E4
LinkDB
All DBs
Position
complement(348805..350298)
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AA seq
497 aa
AA seq
DB search
MPKTPPSHRSIRILVVDDEPDLRTLYELTLLREFYLVDTAESLRQARELLALHSYDALIT
DMRLPDGLGMELITQIKGQQRAERCIVITAYGSTANAIDALKAGAFDYLTKPVDIQQFRS
VVASAVRHVADSQASARPASALHPITESLQSEGQRVLAKLTGRSQCIQALKARIVKIATS
MAPVLITGESGTGKELVAYAIHANSHRASDAWVAVNCAAIPENLLEAEFFGARKGSFTGA
NQDRIGFFQAAQGGTLFLDEIGDLPLPMQSKLLRAIQERKIRPLGTTQEEPVDVRIISAT
HKSLSAEVGAGRFRQDLYYRLNVIDIVTTPLRDRLEDLPDLCEALLAKIARESGRAAPPV
DAAFLTELSRMPLTGNVRELENLLHRAMALGDDNHLEFDVPVATVVANPPPDLHSHSAPE
LPPDAIRSGEVLIPSDLQQYLDDQERGILLRTLQETRFNRTAAAARLGLSLRQIRYRMGR
LCIDVPTSASESGDDAS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaacaccgccgtcccaccgcagtattcgcatcttggtcgttgacgacgagccg
gatttgcgcacgctatatgagctaaccctgctgcgggagttttacctcgtggacaccgca
gagtcgttgcgccaggcacgcgagctgctcgctctccatagctatgacgcactgattaca
gacatgcgtctgcccgatgggttggggatggagttgattacgcagatcaaagggcagcaa
cgcgcagaacgctgcatcgtcatcacggcgtacggttcgacggccaacgccatcgatgcc
ctgaaagccggggccttcgactacctcaccaagccggtggacatccagcaattccgcagc
gtcgtcgcctcagcagtgcggcacgtggcggattcccaagcatcggcacgtcccgcatca
gcgctgcatccgattaccgagagcctgcaatcggaagggcagcgtgttctggccaagtta
acggggcgttcccagtgcatccaggcattgaaagcacgcatcgtaaaaattgccacgagc
atggcacccgtgctcattaccggggaatccggcaccggcaaggaactggtcgcctacgcc
attcatgccaacagccaccgggcttccgacgcatgggtcgccgtcaattgcgcagccatc
ccggaaaacctcttggaagccgagttctttggcgcccgcaaaggctctttcaccggtgcc
aatcaggatcgcatcggattttttcaggctgcacaagggggaaccctgtttctcgatgag
atcggggatctccccttgccgatgcaatcgaagctgctacgtgccattcaggaacgaaaa
atccgccccctgggcaccacgcaagaagaaccggtggacgtccgcatcatcagcgcgacg
cacaaaagcctctctgcggaagtaggtgccggtcgctttcggcaggatttgtactaccgc
ctgaacgtcatcgacatcgttaccacgccgctgcgcgaccggctcgaagatttgccggat
ctgtgcgaagccctgctggccaaaatcgcccgggaatccgggcgcgctgcgccgcccgtc
gatgcagcctttctgaccgaactgtcccgcatgccgttgaccggcaacgtccgagagctg
gaaaacctcttgcaccgcgccatggcgctgggtgatgacaaccacctcgaattcgacgtg
cctgttgccaccgtggtggctaaccctcctcccgatttgcattcccactccgcccccgaa
ttgcctcccgatgccatccgctctggggaggttctcatccccagcgatttgcagcagtac
cttgatgaccaagagcggggaatcttgctgcgcaccctgcaggaaacccggttcaaccgc
actgccgccgctgcgcgtctgggcttgagcctgcgccagattcgataccggatgggccgc
ctgtgcatcgacgtgccgacttctgcctccgaatcgggcgatgatgcctcctga
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