Candidatus Symbiobacter mobilis: Cenrod_0628
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Entry
Cenrod_0628 CDS
T02877
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cbx
Candidatus Symbiobacter mobilis
Pathway
cbx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cenrod_0628 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbx03400
]
Cenrod_0628 (alkA)
Enzymes [BR:
cbx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Cenrod_0628 (alkA)
DNA repair and recombination proteins [BR:
cbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Cenrod_0628 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
AGX86737
UniProt:
U5N5U5
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All DBs
Position
671063..671719
Genome browser
AA seq
218 aa
AA seq
DB search
MAATPWSPEDSGAETPAYWNEACVYLAERDPILGRWIATYGLARLRSRNDAFATLARSIV
GQQISVKAAQSVWDRLLGQMQPASPQALLALSTDTLRSVGMSARKVEYLRDLARHCIEGK
VHTAAWAGMDDEAIIKELVAIRGIGRWTAEMFLIFHLMRPDVLPLDDIGLLRGISQNYLD
GAAIARRQALDIASRWAPYRSVATWYIWRSLDPIPVEY
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaaccccctggtcgcccgaagacagtggcgccgagacccctgcctactggaac
gaggcctgcgtctaccttgccgagcgcgatcccatcctcgggcggtggatcgccacgtat
gggcttgcgcggctacgcagccgcaacgacgcctttgccaccctggcgcgcagcatcgtg
gggcagcaaatctcggtcaaggctgcccagtcggtatgggatcgattgcttggtcagatg
cagcccgcatcgccccaagcattgctcgccttatcgacggacaccttgcgctctgttggc
atgagtgcccgcaaagtcgaatatttgcgcgatttggctcggcattgcatcgaaggcaag
gtgcataccgctgcgtgggcgggcatggacgacgaagcgatcatcaaggagctggtcgcg
attcgcggaatcggtcgctggactgccgagatgttcctgatcttccacctgatgcgcccg
gatgtgctgccgctcgacgatatcgggctgttgcggggaatcagccagaactacctggat
ggcgctgcgattgcgcgtcgccaagccctggatattgccagccggtgggcgccataccgt
tccgtagccacttggtatatttggcgatcgctggatcccattcccgtcgaatattga
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