Candidatus Symbiobacter mobilis: Cenrod_0828
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Entry
Cenrod_0828 CDS
T02877
Symbol
xseA-1
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
cbx
Candidatus Symbiobacter mobilis
Pathway
cbx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Cenrod_0828 (xseA-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbx03400
]
Cenrod_0828 (xseA-1)
Enzymes [BR:
cbx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Cenrod_0828 (xseA-1)
DNA repair and recombination proteins [BR:
cbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Cenrod_0828 (xseA-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
DUF5710
tRNA_anti_2
DUF8083
SATase_N
DUF8626
Motif
Other DBs
NCBI-ProteinID:
AGX86933
UniProt:
U5N9L6
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All DBs
Position
887121..888848
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AA seq
575 aa
AA seq
DB search
MANTYLIVTYSEKDAAKALGAKWDSVQRSWYVPEGRELAPFSQWLPKDGVATKATIQNNA
VENRDHSELAAPATRGISLSALLGGVSTIVSRAYQTGVWVMVEVEELYTVSGHIYLGVSE
RDHNGGVLAKSQAVIWQRTAQTILPKFQSDTGIQFAPGMKILVRGRPIYHQRYGFTITID
NIDSEYTLGELAAKKRKIRERLKTEGVFTANKQLPYPWDFNVVLVIAPAGGAGLGDFQAE
AERLEQFGICHFDYIYSRFQGEGAAREICDKLQKAMSIYISQNNTLPDAVVIIRGGGPVN
DIAWLNDYDLARYICDLPVPALTGIGHERDSTVLDEVANCKYDTPSKVIAGIEQTIKQRT
SDAKIIFEQLINTGIRYIQESKLNTTLLDTEVRRNAMQQLTQGRKTTLALINEMKLNALN
EIRIASDLSAGALQFIKTEAKVHVQQAKQSVPTLWNQIVNDANHSLKAASASTFMMATTV
LDNARIEAAIARNVTKDSMEIIGTSAKQIVQSAKNDSKALMREIVGQGPEKTLKRGFAII
RNQEGKPITRAAQTVTGSTIEIQFIDANVSANIDQ
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatacttatttgattgttacgtattcagaaaaagatgccgccaaagcgcttggc
gcaaaatgggacagtgtgcaaagatcatggtatgtacctgaaggccgtgaactggctcca
ttttcgcaatggctacccaaagatggggttgcgaccaaagcaacaatacaaaataatgca
gtagagaatcgggatcatagtgagctggcagcccctgccacgcggggtatatctctttct
gcattattgggaggagtttctacaatcgtttcacgtgcttaccaaactggcgtgtgggtc
atggtggaagtggaagagttgtatacagtcagtggtcacatttatcttggtgtttcggaa
cgggaccacaacggtggtgtattagccaagtcccaagctgtaatctggcaacgtactgca
caaacaatcctgccaaaatttcagagcgacacgggaatccagtttgcacctggaatgaag
attctggttcgcggacggccaatatatcatcaacgctatggctttactatcactattgat
aatattgactcagaatatacgctaggtgaactagcagccaaaaagaggaaaatccgtgaa
cgcctgaaaacagagggtgtttttactgcaaataagcaacttccttatccatgggatttc
aatgtagtcttggttattgctcctgctggtggcgcaggtttgggcgacttccaagcagaa
gcagaacgactcgaacaattcggtatttgccattttgactatatttatagccggtttcaa
ggcgaaggtgctgccagagaaatttgtgataaattgcaaaaggcaatgtcgatttatatt
agtcaaaataacacattgcccgatgctgttgtaattattcgtggcggtggcccggtcaac
gacatcgcatggctcaatgactatgacttggctagatatatttgcgatttgccagtacca
gctttgacagggattggccatgaacgtgacagtacagtgctggatgaagtagcaaactgt
aagtacgatactccttctaaagttattgcaggcatcgaacagactattaaacaaagaacc
tcggatgcaaaaatcatatttgaacaacttatcaatactggaataagatacatacaagaa
tcaaagttaaatacgacactcttggatactgaagtccgtagaaatgcaatgcagcaactt
acccaaggtcgtaaaactactttggcgttgatcaacgaaatgaaactgaatgcattgaat
gaaatccgtattgcttcagatctttctgctggtgccctgcagtttataaaaacagaagca
aaagtccatgtacagcaagcaaaacaatctgtgcctaccctctggaatcaaatcgtcaat
gatgccaaccatagcctgaaagcagcatcggcttcgacttttatgatggctactaccgtg
ctggacaacgcacgtatcgaagctgccattgccagaaacgtcacaaaagattccatggaa
ataattggtacttcggcaaaacaaatcgtgcaatctgcaaaaaatgacagcaaggcattg
atgcgggaaatagttggccaagggccagaaaaaacgctgaaacgtggatttgcaattatt
cgtaatcaggaaggcaaaccaataacccgggcggcacagactgtgactggatctacaatc
gaaattcaatttattgatgcaaacgtttcagcaaatattgaccaataa
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