Candidatus Symbiobacter mobilis: Cenrod_0889
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Entry
Cenrod_0889 CDS
T02877
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cbx
Candidatus Symbiobacter mobilis
Pathway
cbx00470
D-Amino acid metabolism
cbx00550
Peptidoglycan biosynthesis
cbx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cbx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Cenrod_0889 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Cenrod_0889 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbx01011
]
Cenrod_0889 (murD)
Enzymes [BR:
cbx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Cenrod_0889 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cbx01011
]
Precursor biosynthesis
Amino acid ligase
Cenrod_0889 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AGX86992
UniProt:
U5N6J1
LinkDB
All DBs
Position
complement(955789..957120)
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AA seq
443 aa
AA seq
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MQALQAALPGATCLAGTLGVALVEAGEVDRIVRSPGLRPADWAALNVAAQARGIAVEGEL
SLFVQALTLLRGERGYAPIVLGVTGTNGKTTTTMLTGALIAGAGRTVAVAGNVGFPMLDT
LARHLDANTLPEVWVLELSSFQLDGMQGFAPKAAVVLNLTQDHLDWHGSMEDYARAKACI
FGARTLRVLYRHDPLVMAMQPDDLALAQTVGVDVPRQVGDYGIERVAGVDHLVRAVQGSA
GVEHALLLPCSALRIHGLHNATNALAALALAEAAGCPIGAVRDALCAYRGEPHRVEAVGQ
IADVAFFDDSKGTNVGATVAALEGLGPQRRLIVLLGGDGKGQDFAPLAEPVARYARAAIV
YGRDGAWIHSALGDSAPVYEATSLQQAVDIAGGVAQAGDAVLLSPACASFDMFDDYEHRA
RVFRDAVREWADKTGHPLQELQP
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgctgcaagccgcgttgcctggggcgacgtgccttgcgggaacgctgggggtt
gcgctcgtcgaagcgggcgaggtcgatcggatcgtccgtagcccgggactgcgcccggca
gattgggcggcactcaatgtggcagcgcaggcgcggggcattgccgtcgaaggcgagttg
tccctattcgtgcaagccctgacgctattgcgtggcgagcgcggttatgcgcccatcgtg
ctcggggtgacgggcaccaacggcaagacgacgacgacgatgctcactggcgcgttgatt
gccggggcgggccgtaccgtggccgttgcgggcaatgtaggtttccccatgctcgatacc
ttggcgcgacatctggatgcgaataccttgccggaggtgtgggtgctggagctatccagt
ttccagctcgacggcatgcaagggtttgcccccaaggcggcggtcgtactcaacctcacg
caggatcacttggactggcatgggtcgatggaggactatgcacgggccaaagcatgtatt
tttggggcgcggaccttgcgcgtgctgtaccggcatgatcccctggtcatggcgatgcag
cccgacgatcttgcgctggcgcaaaccgtaggggtcgatgtgcccagacaggttggggac
tacggcatcgagcgtgtggcaggcgtggatcatctggtgcgtgcggtgcagggcagtgcc
ggggtcgagcacgcactattgctgccttgtagcgcgctgcgcatccatggtctgcacaac
gcgacgaatgcgctggccgcgctggcgctggccgaggcagcgggctgcccgatcggcgcc
gtgcgcgatgccctgtgtgcgtaccggggcgaaccgcatcgcgtggaggccgtggggcag
atcgcagacgtggctttcttcgacgacagcaagggaacgaacgtcggcgccacggtggcc
gccctcgaagggctggggccgcagcggcggctcatcgtgctgctgggtggcgatggaaaa
gggcaggatttcgcccccctggcggaacccgttgcgcggtatgcacgtgcggcgatcgtc
tacggacgggacggcgcgtggatccattccgccctgggagacagtgctccggtgtacgaa
gccaccagcttgcagcaagccgtcgatattgccggtggggtggcccaggcgggggatgcc
gtgctgctctcccccgcatgtgcgagctttgacatgtttgacgactatgaacaccgggcg
cgggtgtttcgggatgctgtgcgcgaatgggccgacaagacaggtcaccccttgcaggag
ctgcaaccatga
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