Candidatus Symbiobacter mobilis: Cenrod_0920
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Entry
Cenrod_0920 CDS
T02877
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
cbx
Candidatus Symbiobacter mobilis
Pathway
cbx00541
Biosynthesis of various nucleotide sugars
cbx01100
Metabolic pathways
cbx01250
Biosynthesis of nucleotide sugars
Module
cbx_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
cbx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Cenrod_0920 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cbx01005
]
Cenrod_0920 (rfaD)
Enzymes [BR:
cbx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
Cenrod_0920 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
cbx01005
]
Core region
Cenrod_0920 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
Ldh_1_N
ThiF
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AGX87023
UniProt:
U5N9V1
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All DBs
Position
992235..993254
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AA seq
339 aa
AA seq
DB search
MTRIVVTGAAGFIGSNLIQGLNARGFTDILAVDDLTEGDKFRNLVDAQITDYIDADVFYP
EFAAGSYGQIETIFHQGACSNTMETDGKYMMHNNFTTSVKLYQACQKRGARLIYASSAAT
YGASTGFREEPACERPLNVYGYSKLLLDQRMRRECGLAFERAFSGRVMQVVGLRYFNVYG
PREQHKGRMASVAFHQYKEFLRDGKVRLFGEYGGYGPGEQRRDFVYVDDVVAVNLWFFDH
PAVSGIYNVGTGKAQPFNDLAYAVVNAMRSAQGLSTLSLDAMTLQGLIQYIAIPEALHGK
YQCHTEADLTQLRSTGCMHDFADVHTGVSRYVAWMLQHG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcatcgtcgtcaccggcgcagccggattcatcggtagcaatctgattcaaggg
ctgaacgcacgcggcttcacggacatcctggccgtcgacgacctcaccgaaggcgacaaa
ttccgcaatctggtcgatgcccagatcacggactacatcgacgccgatgtgttctacccg
gaatttgccgcaggctcctacgggcagattgaaaccatcttccaccaaggtgcatgcagc
aacacgatggagaccgatggcaagtacatgatgcacaacaacttcaccacctcggtcaag
ttgtaccaggcttgccagaagcggggggcgcggctgatctacgcatcgagcgcagccacc
tacggggcgagcaccgggttccgggaagagcctgcttgcgaacgccccctcaacgtctat
ggctactccaagctgctactcgaccagcgtatgcgccgcgaatgcgggctggcttttgaa
cgcgccttttcgggccgcgtgatgcaggtcgtggggctgcgctacttcaacgtctacggc
ccccgcgaacaacacaagggccgcatggccagcgtcgcattccaccagtacaaggaattc
ctgcgagacggcaaggtgcggctctttggcgaatatggaggctacggccctggggaacaa
cggcgcgacttcgtttacgtcgacgatgtcgtcgcggtcaacctttggttttttgaccac
ccagccgtctccggcatctacaacgtcggcaccggcaaggcccaacctttcaacgacctg
gcctacgcagtcgttaacgcgatgcggtctgcgcaagggctgtcaacgctcagcctcgac
gcaatgacgctacaggggttgatccagtacatcgcgattcccgaggccttgcacggcaaa
taccagtgccataccgaggccgatctgacccaattgcgttctacgggttgcatgcacgac
tttgccgatgtccatacaggcgtctctcgttatgtggcttggatgctgcaacacggctga
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