Candidatus Symbiobacter mobilis: Cenrod_1052
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Entry
Cenrod_1052 CDS
T02877
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cbx
Candidatus Symbiobacter mobilis
Pathway
cbx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cenrod_1052 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbx03021
]
Cenrod_1052 (rho)
03019 Messenger RNA biogenesis [BR:
cbx03019
]
Cenrod_1052 (rho)
Transcription machinery [BR:
cbx03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Cenrod_1052 (rho)
Messenger RNA biogenesis [BR:
cbx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Cenrod_1052 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
NACHT
AAA
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AGX87146
UniProt:
U5N6I3
LinkDB
All DBs
Position
complement(1135468..1136730)
Genome browser
AA seq
420 aa
AA seq
DB search
MHINELKALHVSEVLKQAEDLEIENTGRMRKQELMFAIIKKRARAGEQILADGVLEVLPD
GFGFLRSPDTSYTASTDDIYISPSQVRRFNLHTGDMIEGEVRTPKDGERYFALNRLDKVN
GGGPEENKHKVMFENLTPLFPKEQMRLERDIKGEENITGRIIDIIAPIGKGQRALLVAPP
KSGKTVMMQHVAHSIAANYPHIHMMVLLVDERPEEVTEMQRTVKGEVIASTFDEPAARHV
HVAEMVIERAKRLVELKKDVVILLDSITRLARAYNNVVPSSGKVLTGGVDANALQRPKRF
LGAARNVEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIHLDRRLYEKRVFPSIQL
NRSGTRREELLLPADILQKTRILRQFLYNMDEIEAMEMVLKQMRATKTNSDFFDLMRRGS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcacattaatgaactcaaggcactgcacgtgtccgaagtactcaaacaggccgaagac
ctggagatcgagaacacaggacggatgcgcaaacaggagctgatgtttgccatcatcaaa
aaacgtgcccgtgcgggggagcaaatccttgccgacggcgtactcgaagtgctgccggat
gggtttgggtttctgcgcagccccgatacgagctataccgcgagtacggatgacatttac
atcagccccagccaggttcggcgattcaacctgcacacgggggacatgatcgaaggggaa
gtacgcacgcccaaggatggggaacgctactttgctctgaaccggctcgacaaggttaac
ggaggcggccccgaggaaaacaaacacaaggtgatgtttgaaaacctgaccccgctcttt
cccaaagagcaaatgcgtctggagcgtgacatcaagggggaagaaaacatcacgggccgc
atcatcgacatcatcgcccccatcggaaaggggcagcgcgccttgttggtggctccgccc
aaaagtggcaagacggtgatgatgcagcacgttgcccattcgatcgcagccaactacccg
catatccacatgatggtgttgcttgtggacgagcgccctgaggaagtgaccgaaatgcag
cgcaccgtcaaaggagaggtgattgcatcgacctttgacgaacccgctgcgcggcatgta
cacgtggccgagatggtgatcgaacgggccaagcggcttgtcgaactcaagaaagacgtc
gtcatcttgctggattcgattacccgcctggcccgtgcgtacaacaacgtcgttccctcc
agtggcaaggtactcaccggcggggtcgatgccaacgcactacaacgtcccaagcggttt
ttgggcgcggcgcgtaacgtggaagaaggggggtcgttgaccatcatcgccacggcgctc
attgataccggcagccgcatggacgaggtcatcttcgaagaattcaagggaacgggcaat
tccgaaatccaccttgaccggcgcttgtacgaaaaaagggtattcccgtcgatccagctc
aatcgcagcggaacccggcgcgaggaattgctgctgccagcagacatcctgcaaaaaacg
cgcatcctgcgccagttcctttacaacatggacgagatcgaagcgatggaaatggtgctc
aagcaaatgcgtgccaccaagaccaatagcgattttttcgatttgatgcgtaggggaagc
tga
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