Candidatus Symbiobacter mobilis: Cenrod_1098
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Entry
Cenrod_1098 CDS
T02877
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
cbx
Candidatus Symbiobacter mobilis
Pathway
cbx03030
DNA replication
cbx03430
Mismatch repair
cbx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cenrod_1098 (holB)
03430 Mismatch repair
Cenrod_1098 (holB)
03440 Homologous recombination
Cenrod_1098 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbx03032
]
Cenrod_1098 (holB)
03400 DNA repair and recombination proteins [BR:
cbx03400
]
Cenrod_1098 (holB)
Enzymes [BR:
cbx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cenrod_1098 (holB)
DNA replication proteins [BR:
cbx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cenrod_1098 (holB)
DNA repair and recombination proteins [BR:
cbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cenrod_1098 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
AGX87191
UniProt:
U5N6M2
LinkDB
All DBs
Position
complement(1187068..1188015)
Genome browser
AA seq
315 aa
AA seq
DB search
MQRLLAQRGHALLLAGPGGLGQFDLAMALAQSWLCEHSTPDGACGACAACHAMAVHTHPD
FFALLSPVKRVELGWPGEEDGGAKPSKDIRIDAMRGAVECAQRTCVRGRGKVVVVYPAER
MNVYTANALLKTLEEPAPGVRFVLATEAEHQILPTLRSRCVRHAMAWPAPDEAIDWLCAQ
GLDRSQAAVALRAAADKPHEAQRFAALAGVWPTLPRAVQLGTVQALQGWTAAQWVDLLQK
LCHDLLRTLCGAAPRFFDPADLPRAGTWGSLTSWAQSLARTARTVEHPYHAGLLLDALLL
EAREAMRADARPTSR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
ttgcagcggttgttggcccagcgtgggcatgcattgctgttggcggggccgggagggctg
gggcagttcgatttggccatggccctagcccaatcttggttgtgcgaacacagcacccct
gacggcgcgtgtggcgcgtgcgcggcctgccatgcgatggcggtgcatacgcacccggac
tttttcgcgctgttgtctcctgtcaagcgggtggagctgggttggcctggcgaagaggat
gggggcgccaaacccagcaaggacatccgcatcgacgccatgcgcggcgccgtcgaatgc
gcccagcgaacctgcgtgcggggccggggcaaggtggtggtggtgtatcccgccgagcgc
atgaatgtctacaccgccaatgctttgctcaagacgctcgaagaacccgcgcccggggta
cggttcgttttggcaaccgaggccgagcaccaaatcctgcctaccctgcgcagccgttgc
gttcgccacgcgatggcttggcctgcccccgacgaagccatcgattggttgtgcgcgcag
gggctggatcgttcgcaggccgctgtggcgctgcgtgcggctgccgacaagccccatgag
gcgcagcgctttgccgccttggcaggggtatggcctacgttgccgagagcggtgcaattg
ggcaccgtgcaagccctgcaggggtggacggcagcgcagtgggttgatctgctgcaaaag
ctttgccacgatctgctgcgtaccttgtgcggcgccgcgccccggttcttcgaccccgca
gatctgccccgcgcgggcacttgggggagcctgacgtcgtgggcgcagtcgcttgcccgc
acggcccgcaccgtcgagcatccctaccacgcagggctattgcttgatgccttgctgctc
gaagcgcgggaggccatgcgtgcggatgcacggcctacaagccgataa
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integrated database retrieval system
