Candidatus Symbiobacter mobilis: Cenrod_1252
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Entry
Cenrod_1252 CDS
T02877
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
cbx
Candidatus Symbiobacter mobilis
Pathway
cbx00860
Porphyrin metabolism
cbx01100
Metabolic pathways
cbx01110
Biosynthesis of secondary metabolites
cbx01120
Microbial metabolism in diverse environments
cbx01240
Biosynthesis of cofactors
Module
cbx_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
cbx00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Cenrod_1252 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbx04147
]
Cenrod_1252 (hemB)
Enzymes [BR:
cbx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
Cenrod_1252 (hemB)
Exosome [BR:
cbx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Cenrod_1252 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
AGX87344
UniProt:
U5NB08
LinkDB
All DBs
Position
complement(1369248..1370270)
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AA seq
340 aa
AA seq
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MPIPLFAPYPEGRPRRLRRDGFIRNLVCEHHLSAHDLIDPVFIVEGTNQRQPVASMPGVF
RLSIDHVLLRAQECVELGIPVMALFPVIDPALKTPDGREALRGEGLVPRTVRALKGAFPQ
LGVMVDVALDPYTSHGQDGLIDAQSHVLNDATVDVLVRQALVLADAGADIVAPSDMMDGR
IKAIRQALEAHHFVDTRILAYSAKYASALYGPFRDAVGSAAQLGSADKKSYQMDPANTDE
AMREVAMDIAEGADMVLVKPGLAYLDVVYRVKTTFRVPTFAYQVSGEYAMIEAAARQGWI
DRDAVMLETLLSCKRAGADAVVSYFSLDAARLLAGVGSAL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcccattcccctgtttgccccatatcccgaagggcgcccgcgccgcctgcgccgcgat
ggtttcatccgcaatctcgtttgcgaacaccacctcagcgcgcacgacctgatcgacccc
gttttcatcgtcgaggggacgaaccagcgccagcccgtcgcgtcgatgccgggggtgttc
cggctcagcatcgatcacgtcctgttgcgtgcgcaggagtgcgtggagctgggcatcccg
gtgatggcgctgttcccggtcattgatcctgccctcaaaacccccgatggtcgcgaggca
ctgcgtggtgaagggctggttccgcgcaccgtgcgggcgctcaagggggctttcccccaa
ctcggcgtgatggtcgatgtggcgctggacccctacaccagccacgggcaggatgggctg
atcgacgcgcagtcgcacgtactcaacgacgcgacggtcgatgtgctcgttcgccaggcg
ctggttctggccgatgcgggcgccgacatcgtcgcgccgagcgacatgatggatggccgt
atcaaggcaattcgccaggcgctggaagcgcatcacttcgtcgatacgcgcatcctcgcc
tacagcgccaaatacgccagcgcgctctatgggccttttcgcgatgcggtcgggtctgcg
gcgcagcttgggtctgccgacaaaaaaagctaccagatggaccccgccaacaccgacgaa
gccatgcgggaagtggcgatggacattgccgaaggggcggatatggtgctcgtcaaaccc
gggttggcgtacctcgacgtggtgtaccgcgtcaaaacgaccttccgcgtacccaccttt
gcgtaccaagtgtccggcgaatacgccatgatcgaagcagcggcccgccagggctggatc
gaccgcgacgccgtcatgctcgaaaccctgctttcctgcaaacgtgctggcgcggatgcc
gtagtgagctacttttcgcttgatgctgcgaggctgctggcgggggtggggtctgctttg
taa
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