Candidatus Symbiobacter mobilis: Cenrod_1582
Help
Entry
Cenrod_1582 CDS
T02877
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cbx
Candidatus Symbiobacter mobilis
Brite
KEGG Orthology (KO) [BR:
cbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbx03016
]
Cenrod_1582 (rnb)
Enzymes [BR:
cbx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Cenrod_1582 (rnb)
Transfer RNA biogenesis [BR:
cbx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Cenrod_1582 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AGX87667
UniProt:
U5N8D9
LinkDB
All DBs
Position
1735024..1737168
Genome browser
AA seq
714 aa
AA seq
DB search
MHLLIEEAGKFHVGRLLTKTDTSSQVELDSGRRLKVKATNILLSIETTDPVAWLAQARHV
GTEVDIPVAWEFAPEEDFDFGELAREYFSAHPSPLEQAGMLFALHGAPHYFRRAGRGRFR
KASAQTVALALAAIEKKKQVAQQIRAWSDALCNAECPAPIREQLHKILFKPDKTSAPYQA
VVDASRRAQCAPLDLLVRAGAIDSAYQFHWKRFLLEHFPQGTAFPRIDLSTLPNSWEELP
LSPVRALSIDDSSTTEIDDALSVQGLGEDIVTVGIHIAIPGLGIEPGDAIDALCRARLST
VYVPGHKVTMLPDAVVERFTLQEGRNCPALSLYLRVRADSLDIVERSTRIEQVHIEANLR
HDRLDGIVTPEWLDGRTQVGTTDGMDRVDSVDGGAGAEGVERYRSALSLLYRLAQRLHAD
REAVRGKPESLGHPDYNFRLMRADAHSDAEPDGSEWVEIGVRRRGAPLDLIVSEAMIVAN
STWGAWLAELGVAGIYRGQPALAPGVKVRMSTKPQIHAGMGVRDYAWSSSPLRRYVDLVN
QWQLIACVRHGTTARLAAPFPARDTRLFAILSDFDATYSAYRDVQNALERFWTLRYLQQR
GVAELEALVLREGLVRALELPLVLTLVQAPVLERGDRVRVRLDKIDEVSLEVRAIYVSTL
DDDAQDLENLADDEDEALPTAITIDVDLADAPEDAGTTDTTDNTVATEDGTLPT
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgcttatcgaagaagccggcaagttccacgtcggcaggctgctgaccaagacc
gatacctccagccaggtcgagctggatagcgggcggcgtctgaaggtcaaggcgaccaat
atcttgctttccatcgagacaaccgaccctgtggcatggcttgcacaagctcggcacgtg
ggcacagaggtagacatccccgtagcctgggagttcgcgccggaagaagatttcgacttt
ggcgagctggcgcgggaatacttttccgcacaccccagccccctggagcaagccgggatg
ctgtttgccctgcacggcgcgccgcactactttcgccgtgcgggccggggccgtttccgc
aaggccagcgcgcaaacggtggccttggcgctggcggcgatagaaaagaaaaagcaggtc
gcccagcagattcgcgcctggtctgacgcactgtgcaacgccgaatgccccgcgccgatc
cgcgagcagctccacaaaatcctattcaagccggacaaaacctccgcgccataccaggca
gtggtcgatgcctcgcgcagggcgcagtgtgctccgctcgacctgctggtacgcgcaggg
gccatcgattcggcctaccagttccactggaaacgctttctgctcgaacactttccgcaa
ggcactgcgttcccccgaatcgatctatcgaccctgcccaactcgtgggaagagctgcct
ttgtcgccggtgcgtgcgttgtcgatcgacgattcatcgacaacggaaatcgacgatgcg
ctctccgtgcaagggctgggggaagacatcgtcaccgttggcatccatatcgccattcca
gggttgggcattgagccaggcgatgccatcgacgccctatgccgcgcccgtctatcgacc
gtctacgttcccggccacaaagtcacgatgctgcccgacgcagtggtcgaacgcttcacc
ctgcaggaaggccgcaactgccctgcgctctcgctgtacctgcgggtgcgtgcggattcg
ctcgacatcgtcgaacggagcacacgcatcgagcaagtgcatatcgaagccaacctccgc
catgaccggctcgacggcatcgtcaccccagaatggctcgatgggcggacgcaagtaggc
accacggatggcatggatagggtggatagcgtcgatggtggcgccggtgcagagggcgtg
gagcgctaccgcagcgcgttgtcgttgctctatcgcctggcccaacggctgcacgcagac
cgagaggccgttcgcggcaaacccgaatccttagggcatccagactacaactttcgcttg
atgcgcgccgatgcccactccgacgcagaacccgatggcagcgagtgggtcgagatcggc
gtgcgtcgccgtggcgccccgctcgacctgatcgtttccgaggcgatgatcgtcgccaac
agcacctggggggcgtggctggccgaactgggcgtggcggggatctatcgggggcaaccc
gcgctggcgcccggcgtcaaggtgcgcatgagcaccaaaccgcaaatccatgcgggaatg
ggcgttcgcgactacgcttggagcagctccccactgcggcggtacgtcgacctcgtcaac
cagtggcaactcatcgcgtgcgtgcggcacgggacgaccgcgcgactggccgccccgttt
ccggcgcgggatacccggctgttcgccatcctctcggacttcgacgccacctactctgcg
taccgcgacgtgcagaacgcgctggaacggttttggacgctgcgctacctgcaacaacgt
ggcgtggccgaacttgaggccctcgtcctgcgcgaagggcttgtgcgtgcgctcgaactc
cccttggtgctgaccctggtacaggcgccggtgctggagcggggtgatcgggttcgggta
cggctggacaagatcgacgaggtgtcgctcgaagtgcgcgccatctatgtctcgacgctg
gacgacgacgcccaggacttggagaacctggccgacgacgaggacgaagcgctccccact
gcgatcaccatcgacgtcgacctggcagacgctcccgaagacgccggtaccaccgacacg
accgacaacaccgtcgccaccgaagacggtaccctgcccacgtga
DBGET
integrated database retrieval system
