Candidatus Symbiobacter mobilis: Cenrod_1624
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Entry
Cenrod_1624 CDS
T02877
Symbol
dpo
Name
(GenBank) bacteriophage-type DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cbx
Candidatus Symbiobacter mobilis
Pathway
cbx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cenrod_1624 (dpo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbx03400
]
Cenrod_1624 (dpo)
Enzymes [BR:
cbx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Cenrod_1624 (dpo)
DNA repair and recombination proteins [BR:
cbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Cenrod_1624 (dpo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Bflower
Motif
Other DBs
NCBI-ProteinID:
AGX87709
UniProt:
U5NBZ5
LinkDB
All DBs
Position
complement(1787170..1788051)
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AA seq
293 aa
AA seq
DB search
MNPTPLRAHLDDRRRAMLREMGVVVWWPQPALAQSAATPSTPATPSTPAIRPTPPRKPPT
VLSPERVAAKADTPPTPDVATATWEAWAQALAGCQACAAAARQVVRQTPRTVPACDWMVV
GDLPDECVDGGQSGAPRLGVPFAGNAGVLLDQILHAVGAQRATLQTVPDIPSRSLAYVTA
VRKCRPMVPAAPTSEELAQCEPFLRREIALVQPKVIVCLGRLAMQVLLREVPPEQSRLPL
GKLRQRVWRFAGVPVVVSYPPDYLLRACPDKANAWVDWCLACDVVEGKAGSSS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccactcccttgcgcgcgcatctggatgaccgccgccgcgccatgctgcgtgaa
atgggtgtcgtcgtctggtggccccagcccgctctggcccaatctgctgccacaccatct
acccctgctaccccatctacccctgccatccggcccacgccccctcggaaaccacccact
gtgctgtcgcccgaacgggtggcagcgaaggctgacaccccgccgaccccggacgtggcc
actgcgacgtgggaggcctgggcgcaagccctggcaggctgtcaggcttgtgcggctgcg
gcacggcaggtggtgcggcagacgccccgaacagtgcccgcttgcgactggatggtcgtg
ggggatctgcccgacgagtgcgtggatgggggacaaagcggggcgccaaggctgggcgtt
ccctttgcagggaatgctggcgtcttgctcgaccagatcctgcacgccgtcggcgcacag
cgcgccacgttgcagacggtacccgacataccgtcgcgctcgctggcgtatgtcacggct
gtgcgcaaatgccgtccgatggttcccgctgcgcctacctctgaagaactggcccaatgc
gaaccgtttttgcgcagggaaatcgccttggtccagccgaaggtcatcgtctgcctgggc
aggctggccatgcaggtgttgctgcgcgaagttcccccggaacaatcccggctccccctg
ggcaagctgcgccagcgtgtgtggcgctttgccggggtgccagtcgtcgtgagctacccg
ccggactacctgctacgcgcatgcccagacaaagccaacgcctgggtggattggtgcctg
gcttgcgacgtggtcgaaggcaaggcaggatcgtcttcgtag
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