Candidatus Symbiobacter mobilis: Cenrod_1662
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Entry
Cenrod_1662 CDS
T02877
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cbx
Candidatus Symbiobacter mobilis
Pathway
cbx03030
DNA replication
cbx03410
Base excision repair
cbx03420
Nucleotide excision repair
cbx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cenrod_1662 (polA)
03410 Base excision repair
Cenrod_1662 (polA)
03420 Nucleotide excision repair
Cenrod_1662 (polA)
03440 Homologous recombination
Cenrod_1662 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbx03032
]
Cenrod_1662 (polA)
03400 DNA repair and recombination proteins [BR:
cbx03400
]
Cenrod_1662 (polA)
Enzymes [BR:
cbx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cenrod_1662 (polA)
DNA replication proteins [BR:
cbx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Cenrod_1662 (polA)
DNA repair and recombination proteins [BR:
cbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Cenrod_1662 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cenrod_1662 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AGX87747
UniProt:
U5N8L7
LinkDB
All DBs
Position
1819435..1822386
Genome browser
AA seq
983 aa
AA seq
DB search
MVAVHTLSSSRPAHPVVLLVDGSSYLYRAYYAMPDLRAIPGDPASPPTGAICGMIQMLLR
LRKDVPCTHAVCIFDAPGPTFRDAIYPAYKAQRSPMPEALREQIDPIHEVVELLGWKVLQ
VPGVEADDVIGTLAAAAQGRGACEGHDGQAKPVEREGRDVLISSWDKDLAQLVDEHVTIV
DTLQGKRRDIAGVTAEFGVPPQQMRDYQVLVGDAVDNVPGVPKVGPKTAVKWLREYGSLE
GILDNAHAIPGAVGQNLRESLGWIPTARELVTIRTDCDLREWIPGFPDLGVLAVSPVRIP
ELADFARRYGVRTVLRDLLAPSPARRGTMGAGSGAGMGTSRERDLFDDAPPAGNAASAGA
NPQPTQEPSPASTPGTPDAPNAPDNRYETILDWATFDAWMERIAAADLVAVDTETTSLDA
MSARLVGISFATAPGHAAYIPLAHQHPDTPAQLPIDTVLQRLRGWLEDPTRPKLGQHTKY
DWHVFANHGIAVQGYVHDTMLQSYVLEVHEPHNLESLARRHLDKVGISYQELCGKGASQI
GFDQVELTRAAQYSCEDSDLTWGVHAVLWPRIRDDERLRGIYELEIASSEALCRIERNGV
CIDAALLGRQSVELGERIASLERQAHEQAGQVFNLQSPKQIAEIFFVRLGLPVVKKTPTG
TPSTDDEVLHKLAQDYPLPATILEHRSLSKLKGTYTDKLPTLVRADTGRVHTHYAQAVTA
TGRLSSIEPNLQNIPVRTPEGRRIREAFIAPPGCAIASADYSQIELRIMAHLSGDAALLL
AFHDGMDVHRATAAEIFGIGTAQVTPEQRRCAKVINFGLIYGMGAFGLAKSLGIDQTAAR
NYIDRYFDRYPGVRAYMDHTRELARRQGYVETVFGRRLYLPEIHAPQAARRAAAERAAIN
APMQGTAADLIKRSMIAVQRDIDAQRLGTKIVMQVHDELVFEVHDAEVAWVRTEVPRLMA
AVAQLQVPLLAEVGVGRNWEEAH
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggttgcagtccacaccctctcttcctcccgccccgcgcatcccgtcgtcctgctcgtc
gacggttcgagctatctgtaccgcgcctactacgcgatgcccgacctgcgggcgattccc
ggtgatccggccagcccgccgacgggtgcgatctgcgggatgatccagatgctgctgcgc
ctgcgcaaggacgtgccctgcacccacgcagtctgcatcttcgatgcccccgggccgacg
ttccgcgatgcgatctaccccgcgtacaaagcgcagcgttcgccgatgcctgaagccttg
cgcgagcagatcgaccccatccatgaagtggtggaactgctggggtggaaggtgttgcaa
gtgccgggcgtcgaggccgacgatgtgatcggcacactcgccgcagccgcacaggggcgg
ggcgcgtgcgaggggcatgatgggcaagccaagccagtagaacgggaagggcgcgatgtg
ctcattagcagctgggacaaagatctggcgcaacttgtcgatgagcacgtcacgatcgtc
gataccctgcaaggcaagcgccgcgacatcgccggggtcactgcggaattcggcgttccc
ccacagcagatgcgtgactaccaagtgctcgtcggcgacgcggttgataacgtccccggc
gttcccaaggtcggccccaaaactgccgtcaaatggctgcgcgagtacggcagcctggaa
ggcatcctcgacaacgcccatgccatccccggggcggtagggcaaaacctgcgcgagagc
ctggggtggatccccaccgcacgggagctggtcacgatccgcacggactgcgacctgcgc
gagtggattccgggcttccccgacctcggcgtgctggcagtcagccccgtgcgcatccca
gaactggcggactttgcccgccgctacggtgtgcgcacggtgctgcgcgacctgctggct
ccctccccggcacggcgggggactatgggcgcgggcagtggtgcaggcatgggcacaagc
cgggaacgggacttgttcgacgacgcaccccccgctggcaacgccgcatccgcaggggcc
aatccccagcctacccaggaaccttccccagcatccacgccaggcaccccagatgcccca
aatgctccagacaaccgctacgagacgatccttgactgggccaccttcgatgcatggatg
gagcgcatcgccgcagccgacctcgtcgccgtcgataccgaaacgacgtcgctcgacgcc
atgtccgcacgcctcgtcggcatcagctttgccacagccccaggccatgccgcctacatc
ccgctggcgcaccagcacccggacacaccggcgcaattgccgatcgacaccgtgctacag
cggctgcgcggctggctcgaagacccgacgcgccccaaactgggccagcacaccaagtac
gactggcacgtcttcgccaaccacggcatcgcagtgcaaggctatgtgcatgacacgatg
ctccaaagctacgtgctcgaagtccacgaaccgcacaacctcgaaagcctcgcccgcagg
catctggacaaggtgggcatctcctaccaagagctttgcggcaagggggccagccagatc
ggcttcgaccaagtggagctgacccgcgccgcgcagtactcgtgtgaagacagcgacctg
acgtggggcgtacacgcggtgctttggccacgcatccgcgacgacgaacggctgcgcggc
atctacgaactcgaaatcgcgtcgagcgaagcgctgtgccgtatcgaacgcaacggtgtc
tgcatcgatgcagcgctgctgggcaggcaaagcgtggagctgggcgaacgcatcgcgagc
ctggagcgccaggcgcacgagcaggccgggcaggtattcaatctgcaaagccccaagcag
atcgcggaaatcttcttcgtgcggctggggttgcccgtcgtcaaaaagacgccgacaggc
accccgagcaccgacgatgaggtgctgcacaaacttgcgcaggactatccgctgcccgcg
acgatcctcgaacaccgcagcctatccaaactcaagggaacgtacacggacaagctgccg
acgctggttcgcgcagacacggggcgggtacacacgcactacgcgcaggcagtgacggcg
acggggcggctttcgagcatcgagccgaatctgcaaaacatccctgtgcgcacgcccgaa
ggccgccgcatccgcgaagccttcatcgccccgccggggtgtgccatcgccagcgccgac
tacagccagatcgagctgcgaatcatggcgcaccttagcggcgatgccgcgctgctgctg
gcgtttcacgatgggatggacgtccaccgcgctacggcagcggagatttttggcatcggc
accgcgcaagtcacccccgaacaacgccgctgcgccaaggtcatcaacttcgggctgatc
tacgggatgggcgccttcgggctggccaagtcgctggggatcgaccagaccgccgcgcgc
aactacatcgaccgctatttcgaccgctaccccggagtgcgcgcctacatggaccacacg
cgggagctggcgcgcaggcaggggtacgttgaaaccgtcttcgggcgcaggctctatctg
ccggaaattcacgcaccccaggcagcacgccgcgccgcagccgaacgcgccgcaatcaac
gccccgatgcagggaaccgctgccgacctaatcaaacgcagcatgatcgcagtgcagcgc
gacatcgacgcgcaacggctcggcaccaagatcgtcatgcaggtacacgacgaactcgtc
ttcgaagtacacgatgccgaagtggcctgggtacgcacggaagtcccccgcctgatggcc
gccgtcgcgcagcttcaggttccgctgctcgccgaagtgggtgtggggcggaattgggaa
gaggcgcattga
DBGET
integrated database retrieval system
