Candidatus Symbiobacter mobilis: Cenrod_2038
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Entry
Cenrod_2038 CDS
T02877
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cbx
Candidatus Symbiobacter mobilis
Pathway
cbx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cenrod_2038 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbx03400
]
Cenrod_2038 (uvrB)
DNA repair and recombination proteins [BR:
cbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cenrod_2038 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Cenrod_2038 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UvrD-helicase
AAA_16
Kinesin
FlaG
Motif
Other DBs
NCBI-ProteinID:
AGX88110
UniProt:
U5N9W2
LinkDB
All DBs
Position
2232334..2234421
Genome browser
AA seq
695 aa
AA seq
DB search
MSASPPLPSGGVFVSFPESPFALYQPYPPAGDQPAAIEQLVAGVHHGEAYQVLLGVTGSG
KTFTMANVIARLGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPEAYVPQ
RDLFIEKDSAINSQIEQMRLSCTKSLLERRDVVIVASVSAIYGIGAPESYHQMIMTLRCG
DRMPQRDILAQLVRMQYTRNDMDFGRGTFRVRGETIDIFPAEHSELAIRLGLWDDEIESL
QFFDPLTGHLRQKTTRFTVYPSSHYVTPREQVLAAVETIKVELAQRAKEFVALGKLVEAQ
RIEQRTRFDLEMLVEVGHCKGIENYSRHLSGTAPGEPPATLIDYLPKDALMFLDESHVLI
GQFGGMYNGDRARKATLVEYGFRLPSAMDNRPLKFEEFQSRMRQAILVSATPAQWERDHA
GQIVEQVVRPTGLVDPEVVVRPASSQVDDVLGEIRRCVDSQERVLITTLTKRMAEQLTDY
LTENGVKVRYLHSDIDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAIFDADK
EGFLRSERSLIQTIGRAARNRSGRAILYADRVTDSMRRAMDETQRRRTKQMAFNAANGIT
PRSIVKEVRDLIDGVYSEKAQQAAQQRDRQQAQRKQAKEMSASDVAREIKRLEKQMVEHA
RNLEFEEAAAVRDRLFILREQVFGAAVVDRPMQGA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcttccccaccgctgccttcgggcggggttttcgtgtcgtttccggaatcccct
ttcgcgctgtaccagccctacccgcctgctggagaccagcctgcggctatcgagcaactg
gtcgccggggtgcatcacggggaggcataccaggtattgctgggggtgacggggtcgggc
aagacgttcaccatggccaacgtcatcgccaggctggggcgcccggcgattgtgtttgcg
ccgaacaaaacgctggcggcgcagttgtatgcggagttccgcgaattttttccccgcaat
gcggtcgagtatttcgtgagctactacgactactaccagccggaagcctatgtgccccaa
cgcgatctgttcatcgagaaagactctgccatcaatagccagatcgagcagatgcggttg
tcctgcaccaagagcttgctggagcggcgcgatgtcgtgatcgtggcctcggtgtcggca
atctatgggatcggcgcgccggagtcgtaccaccagatgatcatgacgctgcgttgcggg
gatcgcatgccgcagcgggacatcctcgcgcagctcgtgcggatgcagtacacgcgcaac
gatatggatttcgggcggggaacgtttcgcgtgcgtggggagacgatcgacatcttccct
gccgagcacagcgagctggccatccggcttgggctgtgggacgatgaaatcgagagcttg
cagttcttcgaccccctgaccggtcatttgcggcagaagactacgcgattcaccgtgtac
cccagcagccactacgtgaccccgcgtgagcaagtgctcgctgcggtcgagacgatcaag
gtcgagttggcgcagcgcgcaaaggagttcgtggcgctaggcaagctggtggaggcgcaa
cgcattgagcaacgcacgcgcttcgacctggaaatgctcgtcgaagtcgggcactgcaaa
ggcatcgaaaactacagcaggcatttgagtggcactgcccccggcgaaccgcctgccacg
ctcatcgactatttgccgaaggatgcgctgatgttcctcgacgaaagccacgtgctcatc
gggcagttcggcgggatgtacaacggcgatcgggcacgcaaggcaacgctggtcgagtac
ggattccgcctcccgagcgcgatggacaacagacccttgaaattcgaggaattccagtcg
cggatgcggcaggccatcctcgtctccgcgacgccggcgcagtgggagcgcgaccatgcc
gggcagatcgtcgaacaggttgtgcggcccacggggctggtcgatccagaggtcgtggtg
cggccagcttcctcgcaggtggacgatgtactcggggagattcgccggtgcgtggactct
caggagcgggtgttgatcaccaccctgaccaagcgtatggcagagcagctcaccgattac
ctcaccgaaaacggggtgaaagtgcggtacctccatagcgacatcgacacggtcgagcgc
gtcgaaatcatcagggatttgcgcctgggggtgttcgacgtgctggtggggatcaatctg
ttgcgcgagggactggacattcccgaggtttccctggtggcgatcttcgatgccgacaag
gaaggctttttgcggtcagagcgttcgctgatccagacgatcgggcgggcggcgcgcaat
cgatccgggcgtgcgatcctgtacgcagaccgggtgaccgattcgatgcggcgtgcgatg
gacgaaacacagcgcaggcgcaccaagcagatggcgttcaacgcagcgaacggcatcacg
ccgcgctccatcgtcaaggaggtgcgcgacctcatcgatggggtgtatagcgaaaaagcc
cagcaggccgcgcagcagcgtgaccgtcaacaggcgcagcgcaagcaggcgaaggaaatg
agcgccagcgacgttgcacgggaaatcaaacggctggaaaaacagatggtcgagcacgcg
cggaacctggagtttgaagaggctgcagccgtgcgggatcggctgttcatcttgcgcgaa
caggtcttcggcgctgcggtggtcgatcggccgatgcagggggcatga
DBGET
integrated database retrieval system
