Candidatus Symbiobacter mobilis: Cenrod_2243
Help
Entry
Cenrod_2243 CDS
T02877
Name
(GenBank) exonuclease V subunit beta
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cbx
Candidatus Symbiobacter mobilis
Brite
KEGG Orthology (KO) [BR:
cbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbx03400
]
Cenrod_2243
Enzymes [BR:
cbx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cenrod_2243
DNA repair and recombination proteins [BR:
cbx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Cenrod_2243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PDDEXK_1
AAA_30
Cas_Csy1
YscK
Motif
Other DBs
NCBI-ProteinID:
AGX88308
UniProt:
U5NDJ3
LinkDB
All DBs
Position
2468983..2472753
Genome browser
AA seq
1256 aa
AA seq
DB search
MKPTPQDWLAEDTAHRARAIDPTGSFLVEAPAGAGKTELLTQRFLALLARVEEPEEVVAL
TFTRKAAGEMRNRVVQSLRMAQQGERPSQPHKQTTFDLSTAVLRRDAERHWGLMEHGGRL
QITTLDALCGQLVRQMPLLSELGSQPGIAEDPDLLYEQAVQDTLEELESDTPLAHALDRI
LDRHDNQKDKLSALLIAMLQRRDQWMHHALVEQDREASLAVFRALIEQDLRDIHKAMPNG
WFDSLQALMPAVAGHLLATQAAPAQTGHQPPSPTGRGAGGECATAEPYQYLLWKNLAAWH
KPLQPTLDDWPIWRALADLLLTVKNELRKQIPAAWGLNKEDRQALQQTLAQGRACECDAH
LARIRTLPHPAYTDDDRQCIEDVTLILREAAARLWLVFQARSEVDFIEMAGKALVALGGE
DAPSDLQLRLDYRISHLLVDEFQDTGPTQVQLLQKLTAGWQPCDGRTLFLVGDPMQSIYR
FRKADVGLFLRVRELGLGSIRPTVLRLYRNNRSHDEVVDWVNHTFPKVMPPSSDAFRGAV
AFEPAVATIGPSPQAQVVIHPIIETGAAGLGVDDAAGAEEADAADGAVDAFPPALSEREA
NTVVGLIRAARQADPEVTVAVLVRARSHLLAVAQALRNDNLPYQAVEIDTLQNVQVVQDL
LSLTRALLHPGDRVHWLAVLRAPWCGLTLADLHALAGGEPYRTVWQCMQDDGAAVGTEGH
AELQASVIHRLSPDGRQRLHHVRTVVGEALQHRGHQRLRRWVEGVWRGLNGPACLTTPAE
FAYARAYFDLLDRLDQEGAIDLPVLQTAVAELYTPPDPAAPTTLQLMTIHKAKGLEFDCV
IVPGIHHGAKLNERALVAWEEWQGEGAEPNLAVAAMERADEAPDKNAPPSLHQYLCKLET
DRTEQETRRLLYVAATRARRALHWVGVAKVKQDGNLAAPRAGSFLKLLWPVAEARFDERL
AQAKEQVGQAEQCEGNAHAAGAAVPARFALPCDATFVPTLIRLRNPVPPPTWERPGAQHA
GDFGIDSDIYRDTYSECTPAEINPKINPVSDRNIGGNINGDSDPEPTSTAPSGQSADPLP
ADIGTLVHRYLEAMARDGLQGWTGARLQRLEPAMRRWLLARGHPQAQADDAARQTLAHLR
TTLQSEMGRWILQRHEEDACELPISTLAGPDDTAQRGYDAHVVDRTFVDNGVRWIVDYKT
TRAMGEGGATQPEATLPPEALEQYREQLLRYRSLFDAEQPVRMGVFWTTVGRWVEV
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccactccccaggattggctggccgaagacacagcccaccgtgcgcgggccatc
gaccccaccggctcttttcttgtcgaagcccctgccggagcgggcaagaccgagctgttg
acgcaacggttcctggccctgctggcgcgggtcgaagaacccgaagaagtcgtcgcgctg
accttcacccgcaaggcggccggggagatgcgcaaccgggtcgtgcaaagcctgcggatg
gcgcagcagggcgagcgccccagccagccccacaaacaaacgaccttcgacctctcgacc
gctgtgctgcgccgcgacgcagaacgccactggggcctgatggaacatggtgggcggctg
caaatcacgacgctggacgcgctctgcgggcaactggtgcggcaaatgccgttgctttcc
gaactcggcagccagcccggcattgccgaagaccccgacctgctctacgaacaagccgtg
caggacacgctggaggaattggagtcggacacccccctggcccatgccctggatcgcatc
ctggatcggcacgacaaccaaaaagacaagctatccgccttactcatcgcgatgctgcaa
cgccgcgaccaatggatgcaccacgccttggttgagcaggatagggaagcatcgctggcc
gttttcagggcgctgatcgagcaggatttgcgggacatccacaaggccatgcccaacggc
tggttcgacagtctgcaagcgctgatgccggcggtggccgggcatttgttagccacgcag
gccgcccccgcgcagacagggcaccaacccccctctcccaccgggagaggggcagggggt
gagtgcgcaaccgccgaaccctaccaatatctgctctggaaaaacctggcagcgtggcac
aaaccattgcaaccgacgttggacgactggcccatctggcgcgccctggccgacttattg
ctcacggtaaaaaacgaactgcgcaagcagattcccgcagcatggggcttgaacaaagag
gatagacaagcactgcaacaaacattggcgcaaggcagggcgtgcgaatgcgatgcacac
cttgcccgcattcgcacactaccccaccccgcgtacaccgacgacgaccgccaatgcatc
gaagacgtgacgctgatcctgcgtgaggcggcggcgcggctgtggttggtctttcaggcg
cgttccgaggtcgatttcatcgagatggcgggcaaggccctggtagcactggggggggag
gacgcgccgagcgacttgcaactgcggctggactaccgcatcagccacctgctggtcgat
gaattccaagacaccgggccgacccaggtgcaattgctgcaaaagctcaccgccggatgg
cagccgtgcgatgggcgcacgctgtttctggtgggggacccgatgcagtcgatctaccgc
ttccgcaaggccgatgttgggctgtttctgcgtgtgcgggagcttgggttggggtcgatc
cgacccacggtgctgcggctgtaccgcaacaaccgttcgcacgacgaagtggtggactgg
gtgaaccacactttccccaaggtcatgccacccagtagcgatgcctttcgcggcgcggtg
gcttttgaacctgccgtggcgaccatcgggcctagcccgcaggcgcaggtggtgatccac
ccgatcattgaaacgggtgctgcgggccttggcgttgacgatgctgctggcgcggaggaa
gccgacgctgcggacggcgctgtcgatgcattcccgcctgccctgagcgaacgcgaagcg
aacaccgtggtcgggctgatccgcgctgcacggcaggccgaccccgaggtcacggtggcc
gtgctggtgcgcgcacgctcccatcttctcgctgtggctcaggctttgcgcaacgacaac
ctgccgtaccaggcggtggaaatcgacaccctccaaaacgtccaggttgtgcaagacttg
ctgagcttgacacgtgcgctgctgcaccctggggatcgggtgcattggcttgccgtgctg
cgcgccccgtggtgcgggctgacgctggccgatttgcacgccctggcggggggggaaccc
tatcgcacagtctggcaatgcatgcaagacgacggcgcggctgtgggtacggagggacat
gcagagctacaggccagcgtaatccaccgcttgtccccggacggaaggcagcgcttgcac
cacgtccgcaccgtggtgggggaagccttgcaacaccggggccaccaacgtctgcgccgg
tgggtggaaggagtttggcgcggcctgaacggcccggcctgcctgacgactcccgcagaa
tttgcctatgcccgtgcgtatttcgatctgctcgaccggctcgatcaagaaggcgcaatc
gacctgccagtgctgcaaactgccgtagcggagctatacacccccccagaccccgcagcg
cccaccaccttgcagttgatgacgatccacaaagccaaggggctggaatttgattgcgtg
atcgtccccggcattcaccacggcgccaagctcaatgaacgcgcgctggtagcctgggag
gaatggcagggcgagggcgcggaaccaaaccttgccgtggcggcgatggagcgggccgac
gaagcaccggacaagaacgccccgccttcgctgcaccaatacctgtgcaagctggaaacc
gaccgcacggaacaggaaacacgccgtctgctgtacgtcgccgccacccgtgcgcggcgg
gcgctgcactgggtgggcgtggcgaaagtcaagcaagatggaaacttggccgcgccgcgt
gcaggcagttttctgaagctgctatggccggtggcagaggcgcggtttgatgaaagattg
gcgcaagcgaaggaacaagtggggcaggccgagcagtgcgagggcaacgcccatgcagcg
ggggcggctgtgcctgcacggtttgctctgccgtgcgatgccacattcgtccccacgctg
atacggctgcggaaccccgtccccccgccgacgtgggagcgccccggcgcccagcacgct
ggcgactttggcattgacagcgatatctaccgggatacctacagcgaatgcactcccgcc
gagatcaaccccaagatcaaccccgttagcgaccggaatatcggcgggaatatcaacggt
gatagcgatcccgaaccaacgagcaccgcgccctccggccagtcggcagaccccttgccc
gccgacatcggcacgctggtacaccgctacctcgaagccatggcacgcgatggcctgcaa
ggctggacgggagcacgcctgcaacgcctggaacccgcgatgcgccggtggttgctggca
cgcggacacccccaagcccaggccgacgatgcagcccgccaaaccctggcccacctgcgc
accacgctgcaaagcgaaatgggccgatggatcttgcagcgccacgaagaagacgcctgc
gaactgccgatttccacgctcgcaggcccggatgacacggcgcaacgaggctatgacgcg
catgtggtggaccgcaccttcgtcgacaacggcgtgcgctggatcgtggactacaaaacc
acccgtgcgatgggtgaggggggtgccacccaacccgaagccaccctaccccccgaagcc
ctggagcaataccgggaacaactgctgcgttaccggagcttgttcgatgcggaacagccc
gtgcggatgggggtgttttggacgacggtggggagatgggtggaggtgtga
DBGET
integrated database retrieval system
