Candidatus Symbiobacter mobilis: Cenrod_2334
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Entry
Cenrod_2334 CDS
T02877
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
cbx
Candidatus Symbiobacter mobilis
Pathway
cbx00260
Glycine, serine and threonine metabolism
cbx00630
Glyoxylate and dicarboxylate metabolism
cbx00670
One carbon pool by folate
cbx00785
Lipoic acid metabolism
cbx01100
Metabolic pathways
cbx01110
Biosynthesis of secondary metabolites
cbx01200
Carbon metabolism
Module
cbx_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
cbx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Cenrod_2334 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Cenrod_2334 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Cenrod_2334 (gcvP)
00670 One carbon pool by folate
Cenrod_2334 (gcvP)
Enzymes [BR:
cbx01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
Cenrod_2334 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AGX88395
UniProt:
U5NAS6
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Position
2574757..2577765
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AA seq
1002 aa
AA seq
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MVDPVHADCSASSTAFLERHLGNTDGIPDVETMLRAVGAASLDALIDEALAPGIARSQDM
ALPPAVDEDAALAELRAIASENRVCKSYIGQGYYGTRTPAVLLRNVLENPAWYTAYTPYQ
AEISQGRLEALMWFQTLVAELTALDVANASMLDEATAAAEAMAMAFRLRRTAGTTFLVDA
ETFPQTIAVLRTRAEPLGIALRVCSIEAMGNGDAMAHGDTTQVPDAAHAAGVPVTPDVPV
APDVPFGALLQYPGASGIVRDDRDGIAALHARGVLVIVAADILALALLTPPGELGADIAI
GSTQRLGLPMGNGGPHAAYMACRKELMRALPGRIVGASVDTHGQIAYRLALQTREQHIRR
DKATSNVCTAQALPAIVAAMYAVYHGPEGLRRIASAIARRTAVLAQGLRELGQTVVHASA
FDTITIDVGSASSSIVERALAAGVNLGVPTMPDVHDVHDVPGTLAMPGLLRIALDETTTD
ADVEALWALFAPLTAPDAFRYADVAQRASTLLPAALERHSSFLQHPVFHRHHSETAMLRL
LRRLSDRDLALDRTMIPLGSCTMKLNATSAMLPMTWPEFADIHPFAPAAQRQGYARLAQQ
LGQWLCAATGYAGVSLQPNAGSQGEYAGLLVIRAWQRAQGQGHRNVCLIPASAHGTNPAS
AALAGMQVVPVACDAQGNVDLDDVRAQCARHADRLAAMMLTYPSTHGVFEDGIRTICALV
HQHGGRVYIDGANMNAMLGLCAPGEFGGDVSHLNLHKTFAIPHGGGGPGVGPVCVAQDLL
PFLPGEPGGIGPVSAAPLGNASVLPISWMYCRMMGARGLREASRMAILHANYLSVRLRAH
YPTLYTRAPVGGKPGRVAHECILDLRPLRDATGITAEDVAKRLMDYGFHAPTLSFPVPGT
LMVEPTESEPIEELDRFIDAMVAIREEIAHVERGEWPRDDNPLRNAPHTAPTLLAASWMH
PYSRERAAALGRDKYWPPVGRIDNAQGDRKPRCTLGAMGEPA
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggttgacccggttcatgcagactgttccgcatcgtccactgcctttctggaacgccat
ctgggtaataccgacggcattcccgacgtcgaaacgatgctccgcgccgtgggggctgcg
tcgctcgacgcgctgatcgacgaggcgctggcgcccggtatcgcccgcagccaagatatg
gcgttgccccctgcggtggacgaagacgccgcgctggccgaactccgcgccatcgccagt
gaaaaccgcgtctgcaaaagctacatcggccaggggtactacggcacccgcacccccgcc
gtgctgctgcgcaatgtgctggaaaaccctgcctggtacaccgcgtacaccccgtaccag
gccgaaatcagccaggggcggctcgaagcgttgatgtggttccagaccctcgttgccgag
ctgaccgcgctggacgtggccaatgcatcgatgctcgacgaagccactgctgcggcagaa
gcaatggcgatggcgttccggctgcggcgcacggcgggaacgactttcctcgtcgatgcg
gaaaccttcccgcagaccatcgccgtgctacgtacccgtgcggagcctttgggcattgcg
ctgcgtgtctgctccatcgaagcgatggggaatggcgatgcgatggcgcacggcgatacg
acgcaagtacccgatgccgcccatgctgctggtgtccccgttactcccgatgttcccgtt
gcccctgatgtcccttttggcgccctattgcaataccctggcgccagcggaatcgtccgc
gatgaccgcgatggcattgccgcactgcatgcacgcggggtgctcgtcatcgtcgctgcg
gacattctggcgctggcgctgctgaccccgcccggagaactcggcgcggacatcgccatc
gggagcacccagcggttggggctgcccatgggcaacggtgggcctcatgccgcatacatg
gcgtgtcgcaaggagctgatgcgggccttgcccggcaggatcgtcggcgcaagcgtggat
acgcacggccagattgcgtaccggctggcgttgcagacgcgcgagcagcacattcgccgc
gacaaggcgacgtcgaacgtatgcactgcgcaggcattgcccgccatcgtcgctgcgatg
tatgccgtctaccacggccccgagggcttgcggcgcattgccagcgccattgcccggcgc
actgcggtgctggcccagggcttgcgcgaactggggcaaaccgtggtgcatgccagtgcc
ttcgacacgatcactatcgatgtgggcagtgcgtcgtcatcaatcgtcgaacgtgcgctg
gctgcgggggtcaatctgggcgtgcccaccatgcccgacgtgcatgacgtgcatgacgtg
cctggcaccctcgcaatgcccggtttgctgcgcattgccctcgacgaaacgacgaccgat
gccgacgtcgaagcgctatgggctttgttcgcccccttgactgcgcctgatgcgttccgc
tacgccgatgtcgcccagcgcgcctccacgctgctgcccgctgcgctggaacggcacagc
agctttttgcagcacccggtttttcaccgccaccatagcgaaaccgcgatgctgcggttg
ctgcgccgcttgtccgaccgcgatctggcgcttgatcggacgatgatcccgctgggcagt
tgcacgatgaagctcaacgccaccagcgcgatgctgccgatgacgtggccggagtttgcc
gacatccacccttttgccccggcggcgcagcggcagggctacgcaaggcttgcccagcaa
ctggggcaatggttgtgcgcggcgacgggctacgcaggggtgagcctgcaacccaatgcg
ggcagccagggtgaatacgcggggctgctcgtcatccgtgcctggcaacgcgcccagggg
caagggcaccgcaacgtctgcctgatccccgcgagcgcccacgggacgaaccctgccagc
gcggcattggccgggatgcaggtggtgccggtggcctgcgacgcgcaaggcaatgtcgat
ctcgacgacgtgcgtgcccagtgcgcccggcacgccgaccggctggccgcgatgatgctg
acgtaccccagcacgcatggggtgtttgaggacggcatccgcacgatctgcgccctcgta
catcagcatggaggacgggtgtatatcgacggcgccaacatgaacgcaatgctgggcttg
tgcgcccctggggaattcggtggggacgtgagccacctcaatctgcacaagaccttcgcc
attccccatggtggtggcgggcctggggtggggccggtatgcgtggcgcaggatctgctg
ccctttctgccgggcgaacctgggggcatcggccccgtcagcgcagcgccgctgggcaat
gcatccgtgctgccgatcagttggatgtactgccgcatgatgggagcgcggggcctgcgc
gaggcttcgcggatggcgatcctgcacgccaactacctgagcgtgcggctgcgcgcccac
tatcccacgctgtacacccgcgccccggtggggggcaaacccggtcgcgtcgcgcatgaa
tgcatcctggacttgcgcccgctgcgggacgctacgggaatcaccgccgaggacgtggcc
aagcggttgatggactacggttttcacgccccgacgctgagctttcccgtccccggcacg
ctgatggtcgaacccaccgagagcgaaccgatcgaggaactcgaccgcttcatcgacgcg
atggtcgcgattcgcgaggaaatcgcccacgtggagcgtggcgaatggccccgcgacgac
aaccccttgcgcaacgcgccgcacaccgccccaaccctgctggccgcatcatggatgcat
ccctattcccgcgaacgtgcggcagccctggggcgcgacaaatactggcccccggtgggc
aggatcgataacgcccaaggtgaccgcaaaccccgctgcacgttgggcgcgatgggcgag
ccagcgtag
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