KEGG   Candidatus Symbiobacter mobilis: Cenrod_2573
Entry
Cenrod_2573       CDS       T02877                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
cbx  Candidatus Symbiobacter mobilis
Pathway
cbx00300  Lysine biosynthesis
cbx00470  D-Amino acid metabolism
cbx01100  Metabolic pathways
cbx01110  Biosynthesis of secondary metabolites
cbx01120  Microbial metabolism in diverse environments
cbx01230  Biosynthesis of amino acids
Module
cbx_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:cbx00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Cenrod_2573 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Cenrod_2573 (dapF)
Enzymes [BR:cbx01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     Cenrod_2573 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: AGX88626
UniProt: U5NAN3
LinkDB
Position
2830107..2831168
AA seq 353 aa
MGGHGARCAGPSKLGGLRPPFLLVVPSQLDGCLMGAILATMRLSFAKMHGAGNDFIVLDE
TRSRLGLTAAAYRFLADRRFGVGADQILTVRPAPEPGVDFAYHIHNADGGEVEQCGNGAR
CFARYVRDAGLTDKNVLRVWTRAGVIEPTLVADGRVRVDMGPPMFALGQVPFDVDGVRAR
PCGTWEQWPLAWGAAQKSARERASEPAWKSAWESVSEPAWVCVLSMGNPHAVLRVDDVET
APVALWGPLIENHPRFPRRVNAGFLQVIDRSHVRLRVYERGAGETLACGTGACAAVVAGV
RAGWLDAEVDVAMRGGALTVRWDGADTPVWLTGPAVFVFRGEIDISDDLLTAP
NT seq 1062 nt   +upstreamnt  +downstreamnt
ttgggtggccatggagcccggtgtgccgggccaagcaagttaggggggctaaggccccct
tttctattggtggttccctcccagcttgatggctgtttgatgggggccattttggcgact
atgcgactttcctttgccaagatgcacggagcgggcaacgatttcatcgtgctcgacgaa
acccgatcccgcctggggttgacggctgctgcgtaccgctttctggcagaccggcggttt
ggcgtaggggcagaccaaatcctgacggtgcggccagcgcccgaacccggggtcgatttt
gcgtaccacatccacaatgccgacgggggagaggtcgagcaatgcgggaacggggcacgc
tgctttgcccgctatgtgcgcgatgcggggttgacggacaaaaacgtcctccgagtctgg
actcgggccggggtgatcgaacccacgctggtggccgatggccgtgtgcgggtcgatatg
gggccgccgatgtttgcgttggggcaggtgccctttgatgtggatggagtgcgcgcccgg
ccctgcggaacgtgggaacaatggccgttggcttggggcgctgcccaaaaatcggcgcgg
gaacgggcatcggaaccggcatggaaatcagcgtgggaatcggtatcggaaccggcatgg
gtgtgcgtgctctcgatggggaacccccacgccgtgctccgggtcgacgatgtggaaacg
gctccagtggccttgtggggcccgttgatcgaaaaccatccccgttttccccggcgggtc
aacgctggctttttgcaggtgatcgaccggagccatgttcgcttgcgtgtgtatgaacgt
ggggcgggggagacgctggcgtgcggcaccggggcctgcgctgcagtggtcgcgggggtt
cgcgccgggtggctcgatgccgaagtggacgtagccatgcgaggcggtgcgctgaccgtg
cggtgggatggggcagacacccccgtgtggttgaccgggccagcggtgttcgtttttcgg
ggggaaatcgacatctccgacgatttgctgactgccccctaa

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