Candidatus Symbiobacter mobilis: Cenrod_2611
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Entry
Cenrod_2611 CDS
T02877
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
cbx
Candidatus Symbiobacter mobilis
Pathway
cbx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Cenrod_2611 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbx03400
]
Cenrod_2611 (xseB)
Enzymes [BR:
cbx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Cenrod_2611 (xseB)
DNA repair and recombination proteins [BR:
cbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Cenrod_2611 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF1110
RALF
Motif
Other DBs
NCBI-ProteinID:
AGX88662
UniProt:
U5NB67
LinkDB
All DBs
Position
2864144..2864401
Genome browser
AA seq
85 aa
AA seq
DB search
MQAPPPQSPACEPVPPGTPYEAALGELERLVASMESGELPLDRLLNEYRRACALVHHCRG
RLEAVEEQFRVLDQGTAKPWTPEAL
NT seq
258 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctccccccccacagtccccagcgtgcgagcccgtaccccccggtaccccttat
gaggccgcgctaggggagctggagcggttggtggcgtcgatggaatcgggcgagttgcct
ttggatcgcttgctcaacgaataccgccgtgcttgtgcgttggtacaccactgccggggg
cggctggaagcagtcgaagaacagtttcgcgtgctggatcagggaacggccaagccatgg
actccggaagccctgtga
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