Clostridium botulinum A2: CLM_0006
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Entry
CLM_0006 CDS
T00883
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cby
Clostridium botulinum A2
Brite
KEGG Orthology (KO) [BR:
cby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cby03032
]
CLM_0006 (gyrB)
03400 DNA repair and recombination proteins [BR:
cby03400
]
CLM_0006 (gyrB)
Enzymes [BR:
cby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CLM_0006 (gyrB)
DNA replication proteins [BR:
cby03032
]
Prokaryotic type
DNA Topoisomerases
CLM_0006 (gyrB)
DNA repair and recombination proteins [BR:
cby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CLM_0006 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ACO87279
UniProt:
C1FPH8
LinkDB
All DBs
Position
4560..6473
Genome browser
AA seq
637 aa
AA seq
DB search
MSQENKQVYDESQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEIVDNSIDEALAGFCT
HIEVFIHKDNSITVVDDGRGMPVGMHSKVKKPAVEVIMTILHAGGKFGGGGYKVSGGLHG
VGASVVNALSEQCEVEVRREGHIWKQKFERGITKTGLDIVGDTEDHGTKIYFKPDIEIFD
ELEFEYDTLAHRLRELAFLNKGIKISLTDERYDKKEMFHYEGGLRSFVLYLNRNKEKLHQ
QPIYVDENKDGCIVEIAMQYNDGYAENIFSFANNIDTIEGGTHLAGFKSALTRVINDYAR
KFNYLKDIDKNLSGDDVREGLTAVISVKLTDPQFEGQTKTKLGNGEVRGIVDTIVGQSIG
SFLEENPNVGKIIIEKGLSASRAREAAKRARELTRRKSILESTSLPGKLSDCSSKDPSLC
EIYLVEGDSAGGSAKQGRNREFQAILPLKGKIMNVEKQRLDKILASDEIRAMITAFGAGI
GKEFDIDKIRYNRIIIMTDADVDGAHIRTLLLTFFYRYMKELIEEGHVYIAQPPLYRIYK
AKKEIYVYSDPELDAALLELGGKDTNTNIQRYKGLGEMNPEQLWETTMDPEHRTLLQVTV
EDAMEADEIFTILMGTKVEPRRDFIESNADKVVNLDI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagaaaataaacaagtttatgatgaaagtcaaattcaagtgttggaaggttta
gaagctgttagaaaaagaccaggaatgtatattggaagcactagtttaaggggacttcat
catttggtttatgaaatagttgataatagtatagatgaagcgctagctggtttttgtaca
catatagaagtttttatacacaaagataattctataactgtggtagacgatggacgtgga
atgccagttggtatgcattcaaaggtaaaaaaacctgctgttgaagtaataatgactata
ttacatgcaggtggaaaatttggtggtggaggctacaaggtttctggtggacttcatggt
gttggagcttctgttgttaatgccttatcagaacaatgtgaagtagaagtaagaagagaa
ggccatatttggaaacaaaaattcgaaagaggtataacaaaaactggattagatatagtt
ggagatacggaagatcatggtacaaaaatatattttaagccagatattgaaatatttgat
gaattagaatttgaatatgatactttagctcacagactcagagaattagcctttttaaac
aaaggtataaaaatttcattaacagatgaaagatatgataaaaaagaaatgttccactat
gagggcggattgagatcttttgtactttatttaaatagaaataaggaaaaattacatcaa
caacctatatatgttgatgaaaataaagatggatgtatagttgagattgctatgcaatat
aacgatggttatgcagaaaatattttttcctttgctaacaatatagataccatagaaggt
ggaactcatttagctggatttaaatcagctctaacaagagttataaatgactatgctaga
aaatttaattacttaaaggatatagataaaaatttatcaggagacgatgttagggaaggt
ctaacagcagttatttcagtaaaattaacagatcctcaatttgaaggacagacaaagaca
aaattaggaaatggtgaagtaagaggaattgtagatacaatagtaggtcagagtataggt
tcttttttagaggaaaatcctaatgtaggtaaaataataattgaaaaaggcctatcagct
tcaagagctagagaggctgcaaaaagagcaagagaacttactagaagaaaatctatttta
gaaagcacgtctcttccaggaaaattatcagattgttcttcaaaggatccatcattatgt
gaaatttatttggtcgaaggagattccgcaggtggatctgcaaaacaaggaagaaataga
gaattccaagctatattacctttaaagggtaaaataatgaatgtggaaaagcaaagattg
gataaaatattagcttcagatgaaatacgtgctatgataactgcatttggagcaggtata
ggaaaagaatttgatattgataaaataagatataatagaataattataatgacagatgct
gacgtagatggagcccatataagaactttacttttaacattcttttatagatacatgaaa
gaattaatagaggaaggtcatgtttatatagctcaaccaccactttatagaatatataag
gctaaaaaagaaatttatgtttattcagatccagaattggatgctgcattattagaattg
ggtggaaaggataccaatactaatattcaaagatacaaaggtcttggagaaatgaatcca
gaacaactttgggaaactactatggacccagaacatagaactttattacaggtaacagta
gaggacgctatggaggcagatgaaatatttactatacttatgggaacaaaagtagaacca
agaagagactttatagaaagtaatgctgataaagtagttaacttggatatataa
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