Clostridium botulinum A2: CLM_0022
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Entry
CLM_0022 CDS
T00883
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
cby
Clostridium botulinum A2
Pathway
cby00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cby00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CLM_0022 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cby01007
]
CLM_0022 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cby03016
]
CLM_0022 (serS)
Enzymes [BR:
cby01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CLM_0022 (serS)
Amino acid related enzymes [BR:
cby01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CLM_0022 (serS)
Transfer RNA biogenesis [BR:
cby03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CLM_0022 (serS)
Prokaryotic type
CLM_0022 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NPV_P10
COG6_N
LRRFIP
KASH_CCD
Sec3_CC
Motif
Other DBs
NCBI-ProteinID:
ACO84594
UniProt:
C1FPI7
LinkDB
All DBs
Position
22539..23819
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AA seq
426 aa
AA seq
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MLDLKRIRNNSNEIKEALNNRGEKFDVTVIDEVLKLDEERRNILVKVEVLKSKRNKVSSE
VPKLKKEGKDVSNIVAEMKNLSEEIKGFDVTLAKIDEKIQYIMLRIPNIPNPQVPDGETD
EDNIEIRNWLEPTKFDFEPKAHWDIGTNLNILDFERAGKVTGSRFTFYKGLGARLERAVI
SYFLDTHTEKHDYTEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDDYFLIPTAEVPVTN
LYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKPEQSYEE
LEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVWMPSYNRYVEISSCSNFED
FQARRANIRYKEDAKAKPQYVHTLNGSGVAIGRTVAAILENYQSEDGSVTIPEVLRPYMG
GREVIK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgttagatttaaaaagaataagaaataattcaaatgaaataaaagaagcattaaacaat
agaggagaaaagtttgatgtaactgtaattgatgaagttttaaaattagatgaagaaaga
agaaatattttagttaaagttgaggttttaaaaagtaagagaaataaagtttcttctgaa
gttcctaaattaaaaaaagaaggaaaagatgtatctaatatagtagctgaaatgaagaat
ttatcagaagagataaaaggatttgatgttactttagctaaaatagatgaaaaaatacaa
tatataatgcttagaatacctaatatacccaacccacaagttccagatggagaaacagat
gaggataatatagaaataagaaattggctggaaccaacaaaatttgattttgaacctaaa
gcacattgggatataggaacaaatttaaatattcttgattttgaaagagctggaaaagta
acaggatcaagatttactttttataaaggattaggggctagattagaaagagcagtaata
tcttattttttagatactcatacagaaaaacatgattatactgaaatattaccaccttat
atggtaaatagaacaagtatgataggaacaggacaattacctaaatttgaagaagacgct
tttaaaatctcagaggatgattacttcttaataccaactgcagaggttcctgtaactaat
ttatatagagatgaaatcttaaaaggtgatgaattaccattaaaacatgtagcttatagt
gcttgttttagatcagaagcaggttcagcaggtagagatacaagaggtcttgttagacaa
catcaatttaataaagtagagcttgttaaatttacaaaaccagaacaatcctatgaagaa
ttggaaaaattaactaatgatgctgaaacagtattaaaagagttgggtattccatataga
gttgtaagaatatgcaaaggtgatttaggatttacagctgcattaaaatatgatttagaa
gtttggatgccaagttacaatagatatgttgaaatatcaagctgtagtaactttgaagac
ttccaagcaagacgtgctaatataagatataaagaagatgcaaaagcaaaaccacaatat
gttcatacattaaatggatcaggagttgctattggaagaactgttgcagctatacttgaa
aactatcaaagtgaagatggatcagttacaataccagaagtgttaagaccttatatggga
ggaagagaagtaataaaataa
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