Clostridium botulinum A2: CLM_0056
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Entry
CLM_0056 CDS
T00883
Name
(GenBank) uracil-DNA glycosylase family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cby
Clostridium botulinum A2
Pathway
cby03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLM_0056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cby03400
]
CLM_0056
Enzymes [BR:
cby01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CLM_0056
DNA repair and recombination proteins [BR:
cby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CLM_0056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACO84433
UniProt:
C1FPZ4
LinkDB
All DBs
Position
complement(47963..48559)
Genome browser
AA seq
198 aa
AA seq
DB search
MDIQESLKNKIKNISEEYAGDKTGGYITGDGPIPCDILFIGEAPGKNEVEEGKPFVGMAG
KNFEKYLNSIGLKREFIRITNTCFFRPIKIKEGKNGRISISNRPPKVSEISLFSSILDEE
INLVNPKLIITLGNVPLKRLTSFKSIGDCHGNIYFIENLNRYVFPMYHPSALTYNRSEEF
HKIYENDWVKLREALDKI
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
ttggatatacaagaatctttaaagaataaaattaaaaatatttcagaagaatatgcaggt
gataaaacaggtggctacataacaggtgacggacctataccatgtgatattctattcata
ggagaagccccaggtaaaaatgaagtagaagaaggtaaaccttttgtaggtatggctggt
aaaaattttgaaaaatatttaaattctataggtcttaaaagggaatttattagaattact
aatacttgtttttttaggcctataaaaatcaaagaaggtaaaaatggaagaatatctata
agcaatagaccacctaaggtttcagaaatatccttatttagttctatccttgatgaagag
attaatttagtaaaccctaaattaataattacattaggaaatgttcccttgaaaagacta
acaagttttaagtccattggtgattgtcatggtaatatttattttattgaaaatttaaat
agatatgtatttccaatgtatcatccatcagctttgacctacaatagaagtgaagaattt
cataaaatctatgaaaatgattgggttaaattaagagaagctctagacaagatttaa
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