Clostridium botulinum A2: CLM_0518
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Entry
CLM_0518 CDS
T00883
Symbol
addA
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cby
Clostridium botulinum A2
Brite
KEGG Orthology (KO) [BR:
cby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cby03400
]
CLM_0518 (addA)
Enzymes [BR:
cby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLM_0518 (addA)
DNA repair and recombination proteins [BR:
cby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CLM_0518 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
DEAD
AAA_12
Cullin_Nedd8
AAA_30
Sputnik_MCP_1st
Motif
Other DBs
NCBI-ProteinID:
ACO86963
UniProt:
C1FSA8
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All DBs
Position
561377..565216
Genome browser
AA seq
1279 aa
AA seq
DB search
MSSTKWTDEQRQAIFTKNCNLLVAAGAGAGKTAVLVQRIIEKILDKEEPIDIDKLLVVTF
TNAAAAEMRERIGDAISKGLDEDPESKVLRKQLTLLNKSNIMTIHSFCLQVIKNNFHTIE
IDPNFRICDETEGILMKQEAIDELFDELYEIENEDFINLVESYASRKDIRLQEVVLELHR
FAKSAPFPYTWLLNMAEGFNVGENFNFEETLWADMIMEDMKVLLHGFKNMLQQSIDVILN
SEGIDYYYEPFKMDLSFINSLLEKSSFKEFRGEIIAYDFPKLPLKRNKDADKEAKERVKK
LRDRVKKRIIELRITLNSYENEFTKKEFIFLYPSMKALSNLVILFDKKYEAKKRERDLID
FNDIEHLCLSILTDKNSEGHIIPSDIALNYRKKFAEVLIDEYQDSNLVQEVIMSMVSRVK
GYWSFYNGQLIFNEEEINLEEPQIGLDIPNRFMVGDVKQSIYRFRQAKPEIFLDKYNEYS
EEEGTKNRKVKLFKNFRSREEVINGVNYLFKQIMSKTIGELDYTEEEALKVGASYGEEVK
GEPIELCLMDKKYEISEEVLKEYNVDEEEALDNIQLEGRLVAKKIQKLVGNNLEGGLKVF
DRKLGEYRNLQYRDIVILMRATSNWAPVFVEELAKEGIPVFADTNSGYFDTAEIKTMISL
LQIIDNPLQDIPLLSVLRSPIASFTDDELIDIRMVNKNITFYECMEIIYRLYKNEKLDSY
YSFYIEDENKINKIIKDMNEKLKNKICSFIEKLKLWREKSIHIDIDEFIWFLYVETGYYG
YAGALQAGEQRQANLRILFQRAKQYAKTSYKGLFNFINFINKLKFSSGDMGSAKILGENE
NVVRIMSIHKSKGLEFPVVILSGTGKNFNMMDLNKNILFHRDLGYGPDYVDTERRIAYPS
LVKNIIKNKIRLETLSEEMRILYVALTRAREKLIITGLINNMDKTVEDWLNLSEDKNKVP
EYAVMSGKTYLDWIGPALIKHKDAVSFREELKMTSELSNIVDDKSKWKIELWNKRELLKE
KVEEDEVEISEKIKETLMNLEESDYKEEIYKRLSFKYKYDNASSIPTKLSVSDVKKQFIL
DEKENTEELFKKLELRKPMFMEEKKKISPSERGTIIHLFMQHLDLKKAENEEDIKEQINR
LIEREFITYEQSKVISSYKILKFCRGELGKRILNSNNVNKEMPFSIEIPALEIYKELDKE
IYKDEKLIIQGVIDCYFEEEDGLVLLDYKTDYVNDIEEIKNRYEIQIKYYEEALNRITGK
NVKDKYLYLFSVDNYIKID
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcactaagtggacagatgagcaaaggcaggctatttttactaagaattgcaac
ttgcttgtggcggcaggggcaggggctggtaagactgctgttttggttcagagaataatt
gaaaaaatattggataaagaggaacctatagatatagataaattattggtagttactttt
actaatgcagctgccgcagaaatgagagagagaataggggatgctatttctaaaggttta
gatgaagacccagagtcaaaggtattaagaaaacaacttaccttattaaataagtcaaat
ataatgactattcactccttttgccttcaagttataaaaaataattttcatactatagaa
atagatcctaattttagaatatgtgatgaaacagaaggaatacttatgaaacaagaagct
atagatgagctttttgatgaattatatgaaatagagaatgaagattttattaatttagta
gaaagctatgccagtagaaaggatattagattacaagaagtggttttagaattacataga
tttgctaaaagcgcaccattcccttatacttggcttttaaatatggcagagggatttaat
gtgggggaaaattttaattttgaagaaacattgtgggcagatatgattatggaggatatg
aaggtattattacatggatttaaaaatatgctacaacaatctatagatgtaatattaaat
tcagagggcatagactattattatgaaccctttaaaatggatttgagttttataaatagt
ttacttgaaaaatcaagttttaaagaatttagaggtgaaataatagcttatgattttcct
aaattgcctttaaagagaaataaggatgcggataaagaggctaaggaaagagttaaaaaa
ttaagagatagagtaaagaaaaggataatagaacttagaattacattaaattcttatgaa
aatgaatttacaaagaaagaatttatatttttatatccttcaatgaaagcactatccaat
ttagtaatactatttgataaaaaatatgaagccaaaaaaagagaacgagatttgattgat
tttaatgatatagagcatttatgtttatccatattaacagataagaatagtgaggggcat
ataattccctcagatattgctttaaattatagaaaaaaatttgcagaagtacttatagat
gaatatcaagatagtaatttggtacaagaagttattatgagtatggtatctagagtaaaa
ggatattggagtttttataatggacaattaatatttaatgaagaagaaataaatttagaa
gaacctcagataggcttagatattcctaatcgatttatggtaggagatgtaaaacaaagt
atatatagatttagacaggcaaaacctgagatatttttagataaatataatgagtatagt
gaagaagaaggtacaaagaatagaaaagttaagctttttaagaactttagaagcagagaa
gaagtaattaatggtgtaaattatttatttaaacaaataatgtctaaaactataggggaa
ttagattacacagaggaagaggccttaaaggttggggctagctatggagaagaggtaaaa
ggtgaacctatagaattatgtttgatggataaaaagtatgaaataagtgaagaagtatta
aaagaatataatgtggatgaagaagaagctttagataatatacaattagagggaagatta
gtagctaaaaaaatacaaaaattagtgggaaataatttagaaggtggattaaaggtattt
gatagaaagttaggagagtacagaaaccttcaatatagagatatagtgattcttatgaga
gcgacatctaactgggcaccagtatttgtagaggagcttgcaaaggaaggcataccagtt
tttgcagatacaaattcaggctattttgatacggcagaaataaaaactatgatatcttta
ttacaaataatagataatcctctgcaagacataccattgctttcagtattaagatcccct
atagcttcttttacagatgatgaacttattgacataagaatggtaaacaaaaatataacc
ttttatgaatgtatggaaataatatatagattatataaaaatgaaaagttagattcctat
tatagtttttatattgaagatgaaaataagataaataaaataataaaagatatgaatgag
aaattaaaaaataaaatatgtagttttatagaaaaattaaagctatggagagagaaatct
attcatatagatatagatgaatttatatggtttttatatgtggaaactggatactatggg
tatgcaggagcgcttcaagcaggagagcaaagacaggctaatttaaggatacttttccaa
agggcaaagcaatatgcaaaaactagttacaaaggattgtttaactttataaattttata
aataaattaaaattcagtagtggagatatgggcagtgcaaaaatacttggagaaaatgaa
aatgtagtaagaataatgagtattcataagagtaaaggactagaatttccagtagttata
ctaagtggaactggaaagaatttcaatatgatggatcttaataaaaatatattatttcat
agagatctaggatatggtccagattatgtagatacagaaagaagaatagcttatccatcc
ttagttaaaaacattataaaaaataaaataagattagaaactctatcagaagaaatgcga
atattatatgtagctttaacaagggcaagagaaaaacttataataacaggattgataaat
aatatggataaaactgtagaggactggttgaatttatcagaggacaaaaataaagtacca
gaatatgctgttatgagtggaaaaacttatttagactggataggtccagctcttataaaa
cataaggatgctgtaagttttagagaagagttaaaaatgacatcagagctttctaatata
gtagatgataagtcaaaatggaaaatagaattatggaataaaagagaattattaaaggaa
aaggttgaagaggatgaagtagaaattagtgaaaaaataaaagaaacattaatgaattta
gaagaaagtgattataaagaagaaatatataaaagactttcttttaagtacaaatatgac
aatgcttcaagcataccaacaaaattgtcagtttcagatgtgaaaaaacaatttatatta
gatgagaaggaaaatacagaggagttatttaaaaaactagaacttagaaaacctatgttt
atggaagaaaaaaagaaaatatctccttcagagagaggtactattatacatttatttatg
caacatttagatttgaaaaaggcagaaaatgaagaggatataaaagaacaaataaatagg
ttaatagaaagagagttcataacctatgagcaatcaaaggttataagttcatataaaata
ttaaaattttgtagaggtgaactaggcaaaagaatacttaattctaataatgtaaataaa
gaaatgcctttttctatagaaatacctgcattagaaatttataaagagttagataaagaa
atatataaagatgaaaaattaataattcaaggggtaatagactgttattttgaggaagag
gatggattagtattattagattataaaacggattatgttaatgacatagaagaaataaag
aatagatatgaaatacagattaaatattatgaagaagccttaaatagaataacaggaaaa
aatgtaaaagataaatatttatatttattttctgtagacaattatataaaaattgattga
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