Clostridium botulinum A2: CLM_0556
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Entry
CLM_0556 CDS
T00883
Symbol
sbcC
Name
(GenBank) exonuclease SbcCD, C subunit
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cby
Clostridium botulinum A2
Brite
KEGG Orthology (KO) [BR:
cby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cby03400
]
CLM_0556 (sbcC)
DNA repair and recombination proteins [BR:
cby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLM_0556 (sbcC)
Archaeal homologous recombinant proteins
CLM_0556 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_27
ABC_tran
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
ACO85750
UniProt:
C1FSE5
LinkDB
All DBs
Position
599885..603415
Genome browser
AA seq
1176 aa
AA seq
DB search
MKPKKLVIKGLNSFIEKQEIDFETLVNRGLFGIFGPTGSGKSSILDAITMALYGDIARDS
TQFINLDTDSLFVSYEFQIASVDEREDYIVSRTVKRDKKGGYKTTAARLVKNTYEEEEII
ADKPRDIQKNIESIIGLTAEDFTRSVVLPQGKFSEFLKLSGKSRRDMLERIFGLEKYGKK
LLERIRKARNKEISSLTLIEGRLEQYKDISKEKLQELKIQYENLLKEKSKIAKEKEESNK
LYEKYKNIWELQEELNIYLNKLENLKKGLLNIEEKKIKVEKGKNALSVKPYIDELSKIES
DRDINKEELQTAMEQLRNIDLNLKNIEEEYKKVSKDKEEEIPLLMQKENNLLQAIEIKKK
VEVIKRERADLVQKYKEKESLIRNKNIVKKHIEENINNISEEIKLKEEEINSLKVDGDRR
EKIQKLYEIDKEYKRLNLEVCNITERINIKIKSLKEYELKYKDTLEIQRDINKKLEYVSG
KREDLIKNSPGNNDILLDKKDYINKLMEIFNDLNKINDRKQELEKNLKEKQVVKLNLEKQ
YKEILQTLKSREEKIMSLEGKIKDIEKMDMASILAANLKEQESCPVCGSMHHIKLAEKVD
IKELEILKEDHRNAFKELENIKIEEKEKNILLISVEKEEELILEELENLKEQLKDRNLED
LRGGLQKEKNDFEKLNENIKDWEKEKLILEENINKLQKEKNDIDKEEAKNHEAISKEKEL
IASIKKDMEEREILFKEKEKEYLNLKEEIKISNVEEEISRIRAYDKKIEEYNKVIKNERE
VLESENNKREEIIKQINIMEIELGKIIEAGKEKKNFIDKEEEEIKKLNVEEISNEHLDKI
KKSIESIKIKEETLKSKLELEGKNREVLWKNKISKEQIKINLEKLYNEKYIHLNKALEEN
KFHTLEDAKLMLICKEEIKELEKEIEEFEKEYNSLNINIERVNKKLKGERIEEESWKDIR
LKKENKEKELEDIIKNIVIEEKLISDMENNIKALKDLLDEKEKVSHKKALLEDIDKLVQG
NKFVEFVAMNQLEYIVFEASKRLKDITRGRYALELDCNGNFTMRDDFNGGGIRPTNTLSG
GETFLTSLALALALSSQIQLKGSSPLEFFFLDEGFGTLDSELLDTVMTSLENLRSDKLSV
GIISHVEELKNRVPIKLIVDPAVPGEGGSKIKIEYS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgaagaaacttgtgattaaagggctaaacagttttatagaaaaacaagaaata
gattttgaaactttagttaatagaggtttgtttggtatatttggtcctacaggcagtgga
aaatccagtatattagatgctataactatggctttatatggagatatagcaagggatagt
actcagtttataaatttagatacggattctttatttgtaagctatgagtttcagatagcc
tcagtagatgaaagagaagattatattgtttctagaactgtaaaaagagataaaaaaggt
ggttataagactaccgcagctaggttagttaaaaatacttacgaggaagaagaaataata
gcagataagccgagagatatacaaaaaaatatagaatctataataggattaaccgcagaa
gattttactcgttcagtagtgttgccacaaggtaaatttagtgagttcttgaagttaagt
ggaaaaagtagaagagatatgctagagagaatatttggattagagaagtatggcaaaaaa
cttttagaaagaataagaaaagcaagaaataaggaaatatcctctttaacattaatagaa
ggaagattagaacagtataaagatatatccaaggaaaaattacaggaactaaaaatacaa
tatgaaaatttgttaaaagaaaaatctaaaatagcgaaagaaaaagaagaaagcaataag
ctttatgaaaagtataaaaatatatgggaacttcaagaggaattaaatatttatttaaat
aaattagaaaatcttaaaaaagggttgctaaatattgaagagaaaaaaataaaagtagaa
aagggaaagaatgcattaagtgttaaaccctatatagatgaacttagcaaaattgaatca
gatagagatataaataaagaggaattacaaactgcaatggagcagttaagaaatatagat
ttaaatttaaaaaatatagaagaagaatacaagaaagtatcaaaggataaagaagaagaa
atacctttattaatgcagaaagaaaataatttactacaggctatagaaataaagaagaag
gttgaagttataaaaagggaaagagcagatctagtacaaaaatataaggaaaaggaaagc
ttaataagaaacaaaaatatagttaaaaaacatatagaggaaaatataaataatatttct
gaggaaataaaattaaaagaagaagaaataaattcattaaaagtagatggagacagaaga
gaaaagatacaaaaactatatgaaatagataaagaatataaaagattaaatttagaagtt
tgtaatataacagaaagaataaatataaaaataaaaagcttaaaagagtatgaattaaag
tataaagatacattagaaatacaaagggatataaataaaaaattagaatatgtttcaggc
aaaagagaagatttaataaaaaactctcctgggaacaatgatattttgcttgataagaaa
gattatataaataaattaatggaaatttttaatgatttaaataaaataaatgatagaaaa
caggaattagaaaaaaatttaaaagagaaacaagtagtaaaattaaatttagaaaaacaa
tataaagaaatattacaaacattaaagtctagagaagaaaaaattatgagcctagaggga
aaaataaaagatatagaaaaaatggatatggcctctatattagctgctaatttaaaggag
caagaatcttgtcctgtatgtggatctatgcatcatattaaattagctgaaaaggtagat
ataaaagaattagaaattctaaaagaagatcatagaaatgcatttaaagaattagaaaat
ataaaaatagaagaaaaagaaaaaaatatacttttaatttctgtggaaaaagaagaagaa
ttaatattagaggaattagaaaatttaaaagagcaattaaaagatagaaacttagaggat
ttaagaggaggactacaaaaagaaaaaaatgattttgaaaaattaaatgaaaatataaaa
gactgggaaaaagaaaaattaatattagaagaaaatataaacaagctacaaaaagaaaaa
aacgatatagataaagaggaggctaaaaatcatgaagctatatcaaaggaaaaagaatta
atagcttctataaaaaaggacatggaagaaagagaaatattatttaaggaaaaagaaaaa
gaatatttaaatttaaaagaagaaattaaaatttctaatgtggaagaagaaataagtaga
attagagcttatgataaaaaaatagaggaatataataaggttataaaaaatgaaagagaa
gttttagagagtgaaaataataaaagagaagaaataattaaacagataaatattatggaa
atagagttaggcaaaataatagaagcgggaaaagaaaagaaaaattttatagataaagaa
gaggaggaaataaaaaaattaaatgtagaagagatttctaatgaacatttagataagata
aaaaaatctatagaaagtataaagataaaagaagaaactttaaaatctaagttggagttg
gaaggtaaaaacagagaagtattatggaaaaataaaataagtaaggaacaaataaaaatt
aacttagaaaaactttataatgaaaaatatattcatttaaataaagccttagaggaaaat
aaattccatactttagaagacgcaaaattaatgttaatatgtaaagaagaaataaaagag
ctagaaaaagagatagaagaatttgaaaaagagtataatagtttaaatataaatatagaa
agagtaaataaaaaattgaagggggaaaggatagaggaagaaagctggaaagatataagg
cttaaaaaagaaaataaggaaaaagagctagaagatataattaaaaatattgtaatagaa
gaaaaacttataagtgatatggaaaataatataaaggcactaaaggacctattagatgaa
aaagaaaaggtgtctcataaaaaagctttattagaagatatagataaattagttcaggga
aataaatttgtagagtttgtagctatgaatcagttagagtatatagttttcgaagcttct
aaaagacttaaggatataacgagaggaagatatgcattagaattagattgtaatggaaat
tttactatgagagatgattttaatggagggggcataagacctacaaatactttatctggt
ggagaaaccttcttaacatcattggcactagctttggcattgtcttcccagatacaacta
aaaggaagttctcctttagaatttttctttttagatgagggctttggaaccttagatagt
gagcttttagatacggttatgacttctttagaaaatttaagaagtgataaattaagtgta
ggaataataagtcatgtagaggaacttaaaaatagagtaccaataaagcttatagtagat
cctgcggtaccaggagagggtggaagtaaaataaaaatagagtatagctag
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