Clostridium botulinum A2: CLM_0603
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Entry
CLM_0603 CDS
T00883
Name
(GenBank) putative ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cby
Clostridium botulinum A2
Pathway
cby03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cby00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CLM_0603
09124 Replication and repair
03420 Nucleotide excision repair
CLM_0603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cby03021
]
CLM_0603
03036 Chromosome and associated proteins [BR:
cby03036
]
CLM_0603
03400 DNA repair and recombination proteins [BR:
cby03400
]
CLM_0603
Enzymes [BR:
cby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CLM_0603
Transcription machinery [BR:
cby03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CLM_0603
Chromosome and associated proteins [BR:
cby03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CLM_0603
DNA repair and recombination proteins [BR:
cby03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CLM_0603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
PDDEXK_1
ResIII
Helicase_C
PhoH
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
ACO83952
UniProt:
C1FSJ0
LinkDB
All DBs
Position
652749..655103
Genome browser
AA seq
784 aa
AA seq
DB search
MECKDEVNISVRNLVEFILRNGDIDIGYFGGSRAQEGIKAHKKLQKIRMESATPLLMIEY
EKEVLLKYAIEYKDFLFKVEGRADGIIIENDSITIEEIKTTTKNLDEIKDNLLHWAQAKC
YAFIYSKEKNLEKINVKLTYYNIKNENIKSMDKTFEIQELEEFFYDIIHKYYVWIEFNYK
FKQERNRDIKLLKFPFKEYREGQRKLAVSVYKTISENKNIFIEAPTGIGKTISTIFPSVK
AIGEGKIDKIFYLTAKNTTRDFVLSNFKNMVNRGMAFKVITLISKEKICLKEEFKCSPEK
CEFAKGHFDRINEAILDILNNENIIDEAVIKKYALKHKVCPFEFSLDISLWCDGIICDYN
YVFDPRVYLRRFFSDGKDDFVLLIDEAHNLLDRSREMFSSSISKSNILSLRKSIKDKSKV
LYRILGKINKELLDIKKIYEVDNYYMEKEKPEKLQILLNNFTSEIEVLMMKGNFQIHDEL
LNFYFEALYFLKICELYGDNYITYGEEYNSDFTIKLFAIDTSGLLNEILKKSKANIFFSG
TFSPIKYFREVLGGDDEDYVLKLNSPFPIENHRILIGYNVSTKYKNRCKSYENICDYINM
ACKIKKGNYMVFFPSYKYMKEVFLLYKEKYPEENVIVQNSSMSDEEREEFIDKFEKETEN
VIGFCVLGGIFSEGIDLAGDKIIGAIIIGVGLPQICVERNLIKNYYDDKKQSGFQYSYIY
PGMTKVMQAAGRVIRTEMDKGIILLIDERFNSYSYKELFPKHWYPNIKVKSQKELELVLK
EFWN
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtaaggatgaagtgaatatatccgttagaaatttagtggagtttatattaaga
aacggagatattgatattggatattttgggggaagcagagctcaagaagggataaaagca
cataagaagttgcaaaaaattaggatggaaagtgctacccctttactcatgattgaatat
gagaaagaagttttattaaaatatgctatagaatataaagactttttatttaaagtagag
ggaagagcagatggaattattatagagaatgactctattactatagaagagattaagact
acaactaaaaacttggatgaaattaaagataatttgctgcactgggctcaagctaagtgt
tacgcctttatttattcaaaggagaaaaatcttgaaaaaattaatgttaaattaacttat
tataatattaaaaatgaaaacattaaaagtatggataaaacttttgaaatacaggaatta
gaagaatttttttatgatattatacataaatattatgtttggatagagtttaattataaa
tttaagcaggaaagaaatagggacattaaattattaaagttcccctttaaagaatataga
gaaggccaaagaaaattagctgtatctgtttataagactataagtgaaaataaaaatata
tttatagaagctcctacaggtataggaaaaactatctctacaatattccctagtgttaag
gctataggagaaggtaaaatagataaaattttttatttaacagctaagaatactacaaga
gattttgttttgagcaattttaaaaatatggtaaatagggggatggcttttaaagttatt
actttaatttccaaggaaaagatttgtcttaaagaggagtttaaatgttcaccggaaaag
tgtgagttcgctaaaggtcattttgatagaataaatgaagctatattagatattttaaat
aatgaaaatattatagatgaagctgttattaaaaaatatgccttaaaacataaagtttgt
ccctttgaattttctttagatataagtttatggtgtgatgggataatctgtgattataat
tatgtttttgatcctagagtatatttaagaagatttttttctgatgggaaggatgatttt
gtattactaatagatgaagctcataatttattagatagatctagagaaatgttttcctca
tctatatctaaaagtaatattttaagtttaagaaagtctattaaagataaaagtaaagtt
ttatatagaattttaggaaaaataaataaagaacttttagatataaaaaaaatatatgaa
gtggataattattatatggaaaaagaaaagccagaaaagttgcaaatattattaaataat
tttacatcagagattgaagtgcttatgatgaaaggaaactttcaaatacatgatgaatta
cttaatttttattttgaggctttatattttctaaagatatgtgaattatatggagataat
tatataacctatggagaagaatataatagtgattttacaattaaactttttgctatagat
acttcaggtttattaaatgaaattttaaaaaagtcaaaggcaaacatatttttttcagga
accttttctcctataaaatatttcagagaagtcttaggaggagacgatgaagattatgtt
ttaaaattaaattctccttttccaatagaaaaccataggattttgataggttacaatgtt
tctacaaaatataaaaatagatgcaaaagctatgagaatatatgtgattatataaatatg
gcctgcaaaataaaaaaaggaaattatatggtttttttcccatcctataaatatatgaaa
gaagtttttttattatataaagaaaaatatccagaagagaatgttatagttcaaaattct
tctatgagtgatgaagagagagaagaatttatagataaatttgaaaaagaaacagaaaat
gtaataggtttttgtgtactaggtgggattttttcagaaggaattgatttagcaggggat
aaaataataggagctataataataggagtaggattaccacaaatatgtgtagaaagaaat
ctaataaagaattattatgatgataagaaacagtctggctttcagtattcatatatttat
ccaggaatgactaaagttatgcaggctgctggtagggtaataagaacagagatggataaa
ggaataatactacttattgatgaacggtttaatagttattcttataaagagttattccct
aaacactggtatcctaatattaaggtgaaaagtcagaaggagttagaattagtattaaag
gaattttggaattaa
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