Clostridium botulinum A2: CLM_1964
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Entry
CLM_1964 CDS
T00883
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal protein S1 homolog
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
cby
Clostridium botulinum A2
Pathway
cby00900
Terpenoid backbone biosynthesis
cby01100
Metabolic pathways
cby01110
Biosynthesis of secondary metabolites
cby03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cby00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CLM_1964
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CLM_1964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cby03011
]
CLM_1964
Enzymes [BR:
cby01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
CLM_1964
Ribosome [BR:
cby03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CLM_1964
Bacteria
CLM_1964
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
S1_2
CsrA
Motif
Other DBs
NCBI-ProteinID:
ACO86548
UniProt:
C1FNU6
LinkDB
All DBs
Position
complement(2025767..2027683)
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AA seq
638 aa
AA seq
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MNVILADKAGFCFGVKRALDTTINTKENLKGKIYTLGPLIHNNDVVNLLKDKGIEPISIQ
DVDKLNKDDTIIIRSHGVPLQTINYLKDKGLNVINTTCPHVANIQIKAKKYYEEGYKIVI
VGDENHPEVIGINGWCNNSAIISKDGANINNLDKKVCVLCQTTEKQENWEKVLTILIKNS
REILAFNTICNATQVRQQSAKKLSEKVDSMIVIGGKNSSNTTKLYEICKSNCKNTIHVEN
AKEIPEHIYKNSNIIGVTAGASTPDWIIKEAINKMNNNDSIIEVSKNEMLNYMNEKEQQI
VVGKVVKGTIVSLNENELFVDLSYKSEGIIPKEEVTLDEESILKESFKVGDEIEAKIVRI
KNEDGYVVLSLKELHREKALKNLKEAFENKQTIKVIVKDAVDAGLICIYNGVRVFIPASH
IELSHVDDLEAYKGLELEVNIIEFIKDRYRTKIVGSRRNILKTIRNKHIEETWNSLEKDT
VVEGEVKRFTDFGAFIEINGVDGLLHVSEISWGRVEKPEDALKIGDKIKVYILDIDKENK
KLALSIKKLIEDPWKSVEIKYPIGNIVLGKVVRFANFGAFIELEPGVDGLVHISKISNKR
IDKPEEELTLGKEVKAKILEVNSVEKRIALSIKDVEEF
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaattttagcagataaagcagggttttgctttggtgttaaaagagctttagat
acaacaataaataccaaagaaaatttaaagggtaaaatttatactttaggtcctttgata
cataataatgatgtggttaatcttttaaaagacaaaggtatagaacctataagtatacag
gatgtagataaacttaacaaagatgatactattattataagatctcatggagtaccactt
caaactataaactatttaaaagacaaagggttaaatgttataaatacaacctgccctcat
gtggccaatatacaaattaaagctaaaaaatattatgaagaaggttacaaaatagtaata
gttggagatgaaaatcatccagaggttattgggataaatggttggtgtaataattctgct
attatctcaaaggatggtgccaatataaataacttagataaaaaagtttgcgtattgtgt
caaaccacagaaaaacaagaaaattgggaaaaggtccttactatattaattaaaaactct
agagaaatattagcttttaatactatatgtaatgcaacacaagtgcgccaacaatctgca
aaaaaattatctgaaaaagtggatagcatgatagttataggtggtaaaaatagttctaat
actactaagctttatgaaatatgtaaaagtaattgcaaaaatacaatacatgttgaaaat
gcaaaggaaatacctgagcacatatataaaaactcaaatattataggcgttactgccgga
gcatctacaccagattggattataaaggaggctattaataaaatgaataataatgatagt
ataatagaagtatcaaaaaatgaaatgcttaactatatgaatgaaaaggagcaacaaata
gtagttggaaaagtagtaaaaggaactatagtttctttaaatgaaaatgagttatttgtt
gatttaagctataaatctgaaggcattatacctaaagaagaagtaactttagatgaagaa
tctatattaaaagaatcctttaaggtaggagatgaaatagaagccaaaatagttagaata
aaaaatgaagatggatacgtggtactatccttaaaggaattgcatcgtgaaaaagcctta
aaaaatttaaaagaagcctttgaaaataaacaaactataaaagttattgtaaaagatgcc
gttgatgctggattaatatgtatatataatggtgttagagtatttattccagcttctcat
atagaactttcccatgtagatgacttagaggcatataaaggcttagaattagaagttaat
atcattgaatttataaaagataggtatagaactaaaatagtaggttcaagaagaaacata
ttaaaaactattagaaataaacatatagaagaaacttggaactctttagaaaaagataca
gtagtagaaggagaagtaaagagattcacagactttggagcttttatagaaattaacgga
gtggatggtttactacatgtttcagaaatatcctggggaagagtagaaaagccagaagat
gcattaaaaataggagataaaataaaagtatatattttagatattgataaggaaaataaa
aaactagctttaagcataaaaaaattaatagaagatccttggaaaagtgtagagataaaa
tatccaataggaaatatagtattaggaaaagtagttagatttgcaaactttggagctttt
atagaattagaacctggtgtagatggcctagtgcatatatcaaaaataagcaataaaaga
atagataaaccagaagaagagttaactttaggaaaagaagtcaaagctaaaatactagaa
gttaattcagttgaaaaaagaattgcattaagtataaaagacgttgaagaattttaa
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