Clostridium botulinum A2: CLM_2228
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Entry
CLM_2228 CDS
T00883
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cby
Clostridium botulinum A2
Pathway
cby03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cby00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLM_2228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cby03019
]
CLM_2228
03009 Ribosome biogenesis [BR:
cby03009
]
CLM_2228
Enzymes [BR:
cby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CLM_2228
Messenger RNA biogenesis [BR:
cby03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CLM_2228
Ribosome biogenesis [BR:
cby03009
]
Prokaryotic type
rRNA helicases
CLM_2228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SecA_DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ACO86834
UniProt:
C1FPR4
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All DBs
Position
2295689..2296819
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AA seq
376 aa
AA seq
DB search
MIKFAELGLSDSIIDVLKKQRIIEPTPIQEESIMFIKNGNDVIAEAQTGTGKTLAFLLPM
FENISPDINAIQGLIITPTRELAIQITEEAMKLKEAKDLNILAAYGGKDIGSQIKKLKNN
IHLVIATPGRLLDHLNRNTLNFKDLKTLVLDEADEMLLMGFKNDVRSIIENTPRKRQTLC
FSATMNSEVKKLAYKNMRDPRLIIIEKEEVTLKNIKQVLIETTDRRKQEDLCKILDEENP
FMAIIFCRTKRRVDTLEEALYKKGYNCEKLHGSITQPKRERIMRSFKNLEIQYLIATDVA
ARGLDITGVTHVFNYDIPENAESYIHRIGRTGRAGEKGYTFLFVAPKDEQTLSIIEREIK
FKISRKTLTNSKEDNK
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgataaaatttgcagaactaggtcttagtgatagtataatagatgttcttaaaaaacaa
agaatcattgagccaacaccaattcaagaagaaagtattatgtttataaaaaatggtaat
gatgttatagctgaagctcaaactggaactggaaaaacccttgcatttttacttccaatg
tttgaaaatatatctcctgatataaacgcaattcaaggtttaataataacacctacaaga
gaacttgctatacaaataactgaggaagctatgaagttaaaagaagctaaagatttgaat
attttagctgcctatggtggtaaagatataggctcacaaataaaaaaacttaaaaataat
atacatttggtaattgcaactcccggtagacttttagatcatcttaatagaaacacacta
aattttaaagatttaaaaacattagtattagatgaagctgatgaaatgctccttatggga
tttaagaatgatgttcgatctattatagagaatacaccaaggaaacgccaaacactatgt
ttttcagcaacaatgaattctgaagttaaaaagctagcctataaaaacatgcgtgatccc
agactaataataatagaaaaagaagaagtaactcttaaaaatatcaaacaagttttaata
gaaaccactgacagaagaaagcaagaggatttgtgcaaaatattagatgaagaaaatcca
tttatggctattatcttttgtagaaccaaaagaagagttgatactcttgaggaagccctt
tataaaaagggttataactgtgaaaagcttcatggtagcataactcaaccaaagcgtgaa
agaataatgcgttcctttaaaaatttagaaattcaatatttaatagctacggatgtagca
gctagaggccttgatataactggtgttactcatgtttttaactatgatattcctgaaaat
gctgaaagctatatacaccgtataggcagaactgggagagctggtgaaaaaggatataca
ttcctatttgtagcacccaaagatgaacaaactttaagtattatagaaagagaaattaaa
tttaaaatttctaggaaaactttaacaaattctaaagaggataacaaataa
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