Clostridium botulinum A2: CLM_2705
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Entry
CLM_2705 CDS
T00883
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cby
Clostridium botulinum A2
Pathway
cby03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cby00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLM_2705 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cby03019
]
CLM_2705 (pnpA)
03016 Transfer RNA biogenesis [BR:
cby03016
]
CLM_2705 (pnpA)
Enzymes [BR:
cby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CLM_2705 (pnpA)
Messenger RNA biogenesis [BR:
cby03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CLM_2705 (pnpA)
Transfer RNA biogenesis [BR:
cby03016
]
Prokaryotic type
tRNA degradation factors
CLM_2705 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
KH_2
PCB_OB
KH-I_KHDC4-BBP
HisK_N
Motif
Other DBs
NCBI-ProteinID:
ACO85560
UniProt:
C1FS53
LinkDB
All DBs
Position
complement(2717087..2719195)
Genome browser
AA seq
702 aa
AA seq
DB search
MIHTLETTVAGRKMKVDFGKTGMLSNAAIFMSYGDTVVMINANASKAPREGIDFFPLSVD
YEERLYSVGKIPGGFIKREGKPSDKSILHARSIDRPLRPLFPKGYRNDVQIVNTVLSVEQ
DNLPEILAINGSSLALCLSSIPFTTPVAAVSVGLVDGEFIINPTVAQRENTILDLTVCAT
KERVMMVEAGGQEIDEETMYSAIMFGFQECKNIVAFQEEAVAKFGKTKNEPILYKADEEV
EKEVKEFAFDMIKEVMYIMDKDERNAQLDKVKEKISEEFSEKYEDKKADIAEVIYKTQKE
VVRNMLLNENRRPDGRSFDEVRPISCEVGILPRTHGTGLFTRGLTQVMTVATLGALGDVQ
ILDGIAEEASKRYMHHYNFPSYSVGEVRPLRGPGRREIGHGALAERALEPLIPSEEEFPY
TIRLVSEVLSSNGSTSQASVCGSTLALLDAGVPIKRPAAGIAMGLITSDDLEKEKVITDI
QGIEDFFGDMDFKVAGTEKGITSIQFDTKIAGLSDNCVRDALEGAKKARLHILGKIKECI
PEPRKELSKYAPRTEIICIDPEKIRDVIGAGGKIINKIIADTNVKIEIKEDGKIFVTSNN
EPEGVKKAISIIEGLTKEVVQGEIYLGKVTKTTNFGAFVEILPGKEGLVHISKLDFARVE
KVEDVVSVGDEILVKVTDIDNQGRINLSRKDAIAKKEEEKDK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgattcatacattagaaactactgtagcaggaagaaaaatgaaagtagactttggtaag
acaggaatgctttcaaatgctgccatatttatgagttatggagatacggtagttatgata
aatgccaacgcttctaaagcaccaagagagggaatagattttttcccattaagcgttgat
tatgaagaaagactatattcagtaggaaaaattccaggaggattcattaaaagagaagga
aaaccttctgacaaatctatattacatgccagatctatagatagaccattaagaccttta
tttccaaagggatatagaaatgatgttcaaatagttaatacagttttatctgtagagcag
gataatttaccagaaatattagctataaatggctcttctttagctttatgcctatctagc
ataccatttacaacaccagtagctgccgtttctgtaggcctagtagatggagagtttata
ataaatccaactgtagcccaaagagaaaatactatactagacttaactgtatgtgctaca
aaagaaagagttatgatggtagaagcaggtggacaggaaatagatgaggaaaccatgtat
agtgctatcatgtttggttttcaagaatgtaaaaacatagttgcattccaagaagaggct
gtggctaagtttggaaaaactaaaaatgaacctatattatataaagcagatgaagaagta
gagaaagaagttaaagaatttgcttttgatatgataaaagaagtcatgtatataatggat
aaagatgaaagaaatgctcagttagataaagttaaagaaaaaatatcagaagagttttca
gaaaaatatgaagacaagaaagcagatatagcagaagttatatataaaactcaaaaagaa
gtagttagaaatatgcttttaaatgaaaatagaagaccagatggaagatcttttgatgaa
gtaagacctataagctgtgaagtaggaatacttcctagaactcatggtacaggtttattt
acaagaggattaactcaagtaatgactgtagctactttaggagctttaggagatgtacaa
atattagatggtatagcagaagaagcgtcaaaacgttatatgcatcattacaatttccca
tcttatagtgttggagaagttagacctttaagaggaccaggaagacgtgaaattggtcac
ggggctttagctgaaagagctttagagccattaattccatctgaagaagaattcccatat
actataagattagtatcagaagtactaagttcaaatggttcaacatcacaagccagcgtt
tgtggaagtacattagctctattagatgcaggtgtacctataaaaagaccagctgcaggt
atagctatggggcttataactagtgatgatttagaaaaagaaaaagtaataacagatatt
caaggtatagaagatttctttggagatatggactttaaagtagcaggaacagaaaaagga
attacatctatacaatttgatacaaaaatagctggattatcagataattgtgtaagagat
gcattagaaggtgctaaaaaggcaagactacacatattaggaaagataaaagaatgtata
ccagaaccaagaaaagaattatctaaatatgcgccaagaacagaaataatatgtatagat
ccagaaaaaataagagatgttataggtgctggtggaaagataataaataaaataatagca
gataccaacgtaaaaatagaaataaaagaagatggaaaaatatttgtaacatctaataat
gagcctgaaggtgttaagaaagctataagtataatagaaggattaacaaaggaagtagtt
caaggagagatttatctaggtaaagtaactaaaactactaattttggagcatttgtagaa
atactaccaggtaaagaaggtctagttcatatatctaaattagattttgctagagtagaa
aaagtggaagatgtagtatctgtaggagatgaaatattagttaaggttacagacatagat
aatcaaggaagaataaatttatcacgcaaagatgctattgcaaagaaagaagaagaaaaa
gataaataa
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